Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.22■□□□□ 0.99
CTSKP43235 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CTSKP43235 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.22■□□□□ 0.99
CTSKP43235 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.22■□□□□ 0.99
CTSKP43235 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTSKP43235 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.21■□□□□ 0.99
CTSKP43235 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTSKP43235 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTSKP43235 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CTSKP43235 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTSKP43235 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.21■□□□□ 0.99
CTSKP43235 GUSBP6-202ENST00000438529 1198 ntBASIC21.21■□□□□ 0.99
CTSKP43235 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.21■□□□□ 0.99
CTSKP43235 CD99P1-205ENST00000527459 561 ntBASIC21.21■□□□□ 0.99
CTSKP43235 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.21■□□□□ 0.99
CTSKP43235 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.21■□□□□ 0.99
CTSKP43235 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CTSKP43235 SLC7A5P2-201ENST00000553010 536 ntBASIC21.21■□□□□ 0.99
CTSKP43235 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.21■□□□□ 0.99
CTSKP43235 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CTSKP43235 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CTSKP43235 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.21■□□□□ 0.99
CTSKP43235 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CTSKP43235 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.21■□□□□ 0.99
CTSKP43235 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.21■□□□□ 0.99
CTSKP43235 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.21■□□□□ 0.99
CTSKP43235 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CTSKP43235 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.21■□□□□ 0.99
CTSKP43235 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CTSKP43235 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.21■□□□□ 0.99
CTSKP43235 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.2■□□□□ 0.98
CTSKP43235 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
CTSKP43235 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.2■□□□□ 0.98
CTSKP43235 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CTSKP43235 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CTSKP43235 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CTSKP43235 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.2■□□□□ 0.98
CTSKP43235 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.2■□□□□ 0.98
CTSKP43235 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.2■□□□□ 0.98
CTSKP43235 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.2■□□□□ 0.98
CTSKP43235 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.2■□□□□ 0.98
CTSKP43235 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.2■□□□□ 0.98
CTSKP43235 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CTSKP43235 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.2■□□□□ 0.98
CTSKP43235 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CTSKP43235 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CTSKP43235 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CTSKP43235 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.19■□□□□ 0.98
CTSKP43235 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
CTSKP43235 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CTSKP43235 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CTSKP43235 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CTSKP43235 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CTSKP43235 AC079089.2-201ENST00000531211 1277 ntBASIC21.19■□□□□ 0.98
CTSKP43235 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.19■□□□□ 0.98
CTSKP43235 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.19■□□□□ 0.98
CTSKP43235 TMEM191A-211ENST00000637163 1067 ntBASIC21.19■□□□□ 0.98
CTSKP43235 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CTSKP43235 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CTSKP43235 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CTSKP43235 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CTSKP43235 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.18■□□□□ 0.98
CTSKP43235 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.18■□□□□ 0.98
CTSKP43235 ANOS2P-203ENST00000472227 1816 ntBASIC21.18■□□□□ 0.98
CTSKP43235 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CTSKP43235 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CTSKP43235 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CTSKP43235 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.17■□□□□ 0.98
CTSKP43235 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.17■□□□□ 0.98
CTSKP43235 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.17■□□□□ 0.98
CTSKP43235 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.17■□□□□ 0.98
CTSKP43235 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.17■□□□□ 0.98
CTSKP43235 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.17■□□□□ 0.98
CTSKP43235 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CTSKP43235 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CTSKP43235 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CTSKP43235 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CTSKP43235 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTSKP43235 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CTSKP43235 AC092068.2-201ENST00000590491 1708 ntBASIC21.16■□□□□ 0.98
CTSKP43235 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTSKP43235 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTSKP43235 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTSKP43235 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CTSKP43235 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.16■□□□□ 0.98
CTSKP43235 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.16■□□□□ 0.98
CTSKP43235 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CTSKP43235 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTSKP43235 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTSKP43235 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTSKP43235 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTSKP43235 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTSKP43235 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.15■□□□□ 0.98
CTSKP43235 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CTSKP43235 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTSKP43235 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.15■□□□□ 0.98
CTSKP43235 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTSKP43235 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CTSKP43235 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.15■□□□□ 0.98
CTSKP43235 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms