Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 SSE2YBR169C 2082 nt2.96□□□□□ -1.94
CDC40P40968 UBP8YMR223W 1416 nt2.96□□□□□ -1.94
CDC40P40968 TRX3YCR083W 384 nt2.96□□□□□ -1.94
CDC40P40968 API2YDR525W 330 nt2.96□□□□□ -1.94
CDC40P40968 COX18YGR062C 951 nt2.96□□□□□ -1.94
CDC40P40968 YIL161WYIL161W 708 nt2.96□□□□□ -1.94
CDC40P40968 YIR023C-AYIR023C-A 324 nt2.96□□□□□ -1.94
CDC40P40968 SAW1YAL027W 786 nt2.96□□□□□ -1.94
CDC40P40968 SWD2YKL018W 990 nt2.96□□□□□ -1.94
CDC40P40968 RPC37YKR025W 849 nt2.96□□□□□ -1.94
CDC40P40968 DSS4YPR017C 432 nt2.96□□□□□ -1.94
CDC40P40968 RSC58YLR033W 1509 nt2.96□□□□□ -1.94
CDC40P40968 KIN2YLR096W 3444 nt2.96□□□□□ -1.94
CDC40P40968 YCG1YDR325W 3108 nt2.96□□□□□ -1.94
CDC40P40968 FLO1YAR050W 4614 nt2.96□□□□□ -1.94
CDC40P40968 EPL1YFL024C 2499 nt2.96□□□□□ -1.94
CDC40P40968 SST2YLR452C 2097 nt2.96□□□□□ -1.94
CDC40P40968 RRG1YDR065W 1098 nt2.95□□□□□ -1.94
CDC40P40968 OTU1YFL044C 906 nt2.95□□□□□ -1.94
CDC40P40968 YGL138CYGL138C 1038 nt2.95□□□□□ -1.94
CDC40P40968 MPC3YGR243W 441 nt2.95□□□□□ -1.94
CDC40P40968 YLR400WYLR400W 474 nt2.95□□□□□ -1.94
CDC40P40968 RAD33YML011C 534 nt2.95□□□□□ -1.94
CDC40P40968 RSM19YNR037C 276 nt2.95□□□□□ -1.94
CDC40P40968 SSP2YOR242C 1116 nt2.95□□□□□ -1.94
CDC40P40968 CWH43YCR017C 2862 nt2.95□□□□□ -1.94
CDC40P40968 FRT2YAL028W 1587 nt2.95□□□□□ -1.94
CDC40P40968 ARG5,6YER069W 2592 nt2.95□□□□□ -1.94
CDC40P40968 MTL1YGR023W 1656 nt2.95□□□□□ -1.94
CDC40P40968 ARF1YDL192W 546 nt2.94□□□□□ -1.94
CDC40P40968 YDR246W-AYDR246W-A 201 nt2.94□□□□□ -1.94
CDC40P40968 LST7YGR057C 729 nt2.94□□□□□ -1.94
CDC40P40968 RGI2YIL057C 495 nt2.94□□□□□ -1.94
CDC40P40968 ARC19YKL013C 516 nt2.94□□□□□ -1.94
CDC40P40968 MRPL3YMR024W 1173 nt2.94□□□□□ -1.94
CDC40P40968 RUF5-1RUF5-1 710 nt2.94□□□□□ -1.94
CDC40P40968 RUF5-2RUF5-2 710 nt2.94□□□□□ -1.94
CDC40P40968 PFY1YOR122C 381 nt2.94□□□□□ -1.94
CDC40P40968 MCT1YOR221C 1083 nt2.94□□□□□ -1.94
CDC40P40968 YOR342CYOR342C 960 nt2.94□□□□□ -1.94
CDC40P40968 RRP7YCL031C 894 nt2.94□□□□□ -1.94
CDC40P40968 YNR065CYNR065C 3351 nt2.94□□□□□ -1.94
CDC40P40968 IRC3YDR332W 2070 nt2.94□□□□□ -1.94
CDC40P40968 UTP6YDR449C 1323 nt2.93□□□□□ -1.94
CDC40P40968 MPS1YDL028C 2295 nt2.93□□□□□ -1.94
CDC40P40968 YDR336WYDR336W 945 nt2.93□□□□□ -1.94
CDC40P40968 YDR535CYDR535C 501 nt2.93□□□□□ -1.94
CDC40P40968 BUD25YER014C-A 462 nt2.93□□□□□ -1.94
CDC40P40968 SMX2YFL017W-A 234 nt2.93□□□□□ -1.94
CDC40P40968 tL(UAG)JtL(UAG)J 82 nt2.93□□□□□ -1.94
CDC40P40968 tL(UAG)L1tL(UAG)L1 82 nt2.93□□□□□ -1.94
CDC40P40968 tL(UAG)L2tL(UAG)L2 82 nt2.93□□□□□ -1.94
CDC40P40968 PRP18YGR006W 756 nt2.93□□□□□ -1.94
CDC40P40968 SDS3YIL084C 984 nt2.93□□□□□ -1.94
CDC40P40968 YIL102C-AYIL102C-A 228 nt2.93□□□□□ -1.94
CDC40P40968 AAR2YBL074C 1068 nt2.93□□□□□ -1.94
CDC40P40968 BEM4YPL161C 1902 nt2.93□□□□□ -1.94
CDC40P40968 TPO5YKL174C 1857 nt2.92□□□□□ -1.94
CDC40P40968 CDC5YMR001C 2118 nt2.92□□□□□ -1.94
CDC40P40968 PRP31YGR091W 1485 nt2.92□□□□□ -1.94
CDC40P40968 FAP7YDL166C 594 nt2.92□□□□□ -1.94
CDC40P40968 YER165C-AYER165C-A 357 nt2.92□□□□□ -1.94
CDC40P40968 PAU13YHL046C 363 nt2.92□□□□□ -1.94
CDC40P40968 YHR173CYHR173C 339 nt2.92□□□□□ -1.94
CDC40P40968 HIS5YIL116W 1158 nt2.92□□□□□ -1.94
CDC40P40968 YJR071WYJR071W 369 nt2.92□□□□□ -1.94
CDC40P40968 YBL010CYBL010C 843 nt2.92□□□□□ -1.94
CDC40P40968 RIF2YLR453C 1188 nt2.92□□□□□ -1.94
CDC40P40968 YNL109WYNL109W 546 nt2.92□□□□□ -1.94
CDC40P40968 ASI2YNL159C 870 nt2.92□□□□□ -1.94
CDC40P40968 YNL171CYNL171C 369 nt2.92□□□□□ -1.94
CDC40P40968 YDR034C-DYDR034C-D 5313 nt2.92□□□□□ -1.94
CDC40P40968 VIP1YLR410W 3441 nt2.92□□□□□ -1.94
CDC40P40968 RIX1YHR197W 2292 nt2.91□□□□□ -1.94
CDC40P40968 GYL1YMR192W 2163 nt2.91□□□□□ -1.94
CDC40P40968 VPS3YDR495C 3036 nt2.91□□□□□ -1.94
CDC40P40968 SSU1YPL092W 1377 nt2.91□□□□□ -1.94
CDC40P40968 MNT3YIL014W 1893 nt2.91□□□□□ -1.94
CDC40P40968 PET100YDR079W 336 nt2.91□□□□□ -1.94
CDC40P40968 ECM11YDR446W 909 nt2.91□□□□□ -1.94
CDC40P40968 MPS2YGL075C 1164 nt2.91□□□□□ -1.94
CDC40P40968 USE1YGL098W 738 nt2.91□□□□□ -1.94
CDC40P40968 UTP11YKL099C 753 nt2.91□□□□□ -1.94
CDC40P40968 YAL064W-BYAL064W-B 381 nt2.91□□□□□ -1.94
CDC40P40968 MRPL20YKR085C 588 nt2.91□□□□□ -1.94
CDC40P40968 YLL037WYLL037W 381 nt2.91□□□□□ -1.94
CDC40P40968 HMX1YLR205C 954 nt2.91□□□□□ -1.94
CDC40P40968 SEC65YML105C 822 nt2.91□□□□□ -1.94
CDC40P40968 RIM11YMR139W 1113 nt2.91□□□□□ -1.94
CDC40P40968 ATG16YMR159C 453 nt2.91□□□□□ -1.94
CDC40P40968 RHO5YNL180C 996 nt2.91□□□□□ -1.94
CDC40P40968 POL30YBR088C 777 nt2.91□□□□□ -1.94
CDC40P40968 YEL025CYEL025C 3567 nt2.91□□□□□ -1.94
CDC40P40968 MAK21YDR060W 3078 nt2.91□□□□□ -1.94
CDC40P40968 RCY1YJL204C 2523 nt2.9□□□□□ -1.94
CDC40P40968 SNT1YCR033W 3681 nt2.9□□□□□ -1.95
CDC40P40968 YDR230WYDR230W 348 nt2.9□□□□□ -1.95
CDC40P40968 BRR6YGL247W 594 nt2.9□□□□□ -1.95
CDC40P40968 YGR073CYGR073C 372 nt2.9□□□□□ -1.95
CDC40P40968 EFG1YGR271C-A 702 nt2.9□□□□□ -1.95
Retrieved 100 of 7,029 protein–RNA pairs in 19.5 ms