Protein–RNA interactions for Protein: P36534

MRPL40, 54S ribosomal protein L40, mitochondrial, yeastyeast

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MRPL40P36534 AIM25YJR100C 984 nt3.3□□□□□ -1.88
MRPL40P36534 OXR1YPL196W 822 nt3.3□□□□□ -1.88
MRPL40P36534 XRN1YGL173C 4587 nt3.3□□□□□ -1.88
MRPL40P36534 STP2YHR006W 1626 nt3.3□□□□□ -1.88
MRPL40P36534 VAS1YGR094W 3315 nt3.29□□□□□ -1.88
MRPL40P36534 PIN4YBL051C 2007 nt3.29□□□□□ -1.88
MRPL40P36534 PAM1YDR251W 2493 nt3.29□□□□□ -1.88
MRPL40P36534 NKP1YDR383C 717 nt3.29□□□□□ -1.88
MRPL40P36534 YER165C-AYER165C-A 357 nt3.29□□□□□ -1.88
MRPL40P36534 EDC1YGL222C 528 nt3.29□□□□□ -1.88
MRPL40P36534 SAY1YGR263C 1275 nt3.29□□□□□ -1.88
MRPL40P36534 COX23YHR116W 456 nt3.29□□□□□ -1.88
MRPL40P36534 YLR154C-HYLR154C-H 132 nt3.29□□□□□ -1.88
MRPL40P36534 YLR156C-AYLR156C-A 132 nt3.29□□□□□ -1.88
MRPL40P36534 YLR157C-CYLR157C-C 132 nt3.29□□□□□ -1.88
MRPL40P36534 YLR159C-AYLR159C-A 132 nt3.29□□□□□ -1.88
MRPL40P36534 YLR363W-AYLR363W-A 258 nt3.29□□□□□ -1.88
MRPL40P36534 COS1YNL336W 1146 nt3.29□□□□□ -1.88
MRPL40P36534 NIP7YPL211W 546 nt3.29□□□□□ -1.88
MRPL40P36534 YPR053CYPR053C 456 nt3.29□□□□□ -1.88
MRPL40P36534 STE24YJR117W 1362 nt3.28□□□□□ -1.88
MRPL40P36534 SIN3YOL004W 4611 nt3.28□□□□□ -1.88
MRPL40P36534 YOR296WYOR296W 3870 nt3.28□□□□□ -1.88
MRPL40P36534 REC8YPR007C 2043 nt3.28□□□□□ -1.88
MRPL40P36534 SMT3YDR510W 306 nt3.28□□□□□ -1.88
MRPL40P36534 GRX2YDR513W 432 nt3.28□□□□□ -1.88
MRPL40P36534 CFD1YIL003W 882 nt3.28□□□□□ -1.88
MRPL40P36534 SDP1YIL113W 630 nt3.28□□□□□ -1.88
MRPL40P36534 RNH203YLR154C 333 nt3.28□□□□□ -1.88
MRPL40P36534 SHH3YMR118C 591 nt3.28□□□□□ -1.88
MRPL40P36534 CAT5YOR125C 702 nt3.28□□□□□ -1.88
MRPL40P36534 RPA43YOR340C 981 nt3.28□□□□□ -1.88
MRPL40P36534 PLM2YDR501W 1566 nt3.28□□□□□ -1.88
MRPL40P36534 SMC3YJL074C 3693 nt3.28□□□□□ -1.88
MRPL40P36534 PTM1YKL039W 1572 nt3.28□□□□□ -1.88
MRPL40P36534 STU2YLR045C 2667 nt3.27□□□□□ -1.89
MRPL40P36534 EMP70YLR083C 2004 nt3.27□□□□□ -1.89
MRPL40P36534 HUL5YGL141W 2733 nt3.27□□□□□ -1.89
MRPL40P36534 DOG1YHR044C 741 nt3.27□□□□□ -1.89
MRPL40P36534 MDV1YJL112W 2145 nt3.27□□□□□ -1.89
MRPL40P36534 RPS21BYJL136C 264 nt3.27□□□□□ -1.89
MRPL40P36534 EMC2YJR088C 879 nt3.27□□□□□ -1.89
MRPL40P36534 YMR141CYMR141C 309 nt3.27□□□□□ -1.89
MRPL40P36534 snR34snR34 203 nt3.27□□□□□ -1.89
MRPL40P36534 snR42snR42 351 nt3.27□□□□□ -1.89
MRPL40P36534 ARG5,6YER069W 2592 nt3.27□□□□□ -1.89
MRPL40P36534 JIP5YPR169W 1479 nt3.27□□□□□ -1.89
MRPL40P36534 DNM1YLL001W 2274 nt3.27□□□□□ -1.89
MRPL40P36534 CIN1YOR349W 3045 nt3.27□□□□□ -1.89
MRPL40P36534 ITT1YML068W 1395 nt3.26□□□□□ -1.89
MRPL40P36534 REG1YDR028C 3045 nt3.26□□□□□ -1.89
MRPL40P36534 TAO3YIL129C 7131 nt3.26□□□□□ -1.89
MRPL40P36534 DTD1YDL219W 453 nt3.26□□□□□ -1.89
MRPL40P36534 YDR290WYDR290W 330 nt3.26□□□□□ -1.89
MRPL40P36534 PMI40YER003C 1290 nt3.26□□□□□ -1.89
MRPL40P36534 CDC26YFR036W 375 nt3.26□□□□□ -1.89
MRPL40P36534 YGR017WYGR017W 894 nt3.26□□□□□ -1.89
MRPL40P36534 EPT1YHR123W 1176 nt3.26□□□□□ -1.89
MRPL40P36534 GOT1YMR292W 417 nt3.26□□□□□ -1.89
MRPL40P36534 HHF2YNL030W 312 nt3.26□□□□□ -1.89
MRPL40P36534 YSF3YNL138W-A 258 nt3.26□□□□□ -1.89
MRPL40P36534 YBL096CYBL096C 309 nt3.26□□□□□ -1.89
MRPL40P36534 TIM12YBR091C 330 nt3.26□□□□□ -1.89
MRPL40P36534 CDH1YGL003C 1701 nt3.26□□□□□ -1.89
MRPL40P36534 VIP1YLR410W 3441 nt3.26□□□□□ -1.89
MRPL40P36534 PBS2YJL128C 2007 nt3.26□□□□□ -1.89
MRPL40P36534 SMC2YFR031C 3513 nt3.25□□□□□ -1.89
MRPL40P36534 FAR1YJL157C 2493 nt3.25□□□□□ -1.89
MRPL40P36534 GCD14YJL125C 1152 nt3.25□□□□□ -1.89
MRPL40P36534 APC9YLR102C 798 nt3.25□□□□□ -1.89
MRPL40P36534 BLS1YLR408C 369 nt3.25□□□□□ -1.89
MRPL40P36534 SSM4YIL030C 3960 nt3.25□□□□□ -1.89
MRPL40P36534 SIZ1YDR409W 2715 nt3.25□□□□□ -1.89
MRPL40P36534 MYO5YMR109W 3660 nt3.24□□□□□ -1.89
MRPL40P36534 POL2YNL262W 6669 nt3.24□□□□□ -1.89
MRPL40P36534 TFC1YBR123C 1950 nt3.24□□□□□ -1.89
MRPL40P36534 FAP7YDL166C 594 nt3.24□□□□□ -1.89
MRPL40P36534 tF(GAA)DtF(GAA)D 73 nt3.24□□□□□ -1.89
MRPL40P36534 tF(GAA)NtF(GAA)N 73 nt3.24□□□□□ -1.89
MRPL40P36534 IZH1YDR492W 951 nt3.24□□□□□ -1.89
MRPL40P36534 SNX4YJL036W 1272 nt3.24□□□□□ -1.89
MRPL40P36534 YNL013CYNL013C 378 nt3.24□□□□□ -1.89
MRPL40P36534 MDJ2YNL328C 441 nt3.24□□□□□ -1.89
MRPL40P36534 snR11snR11 258 nt3.24□□□□□ -1.89
MRPL40P36534 GRX1YCL035C 333 nt3.24□□□□□ -1.89
MRPL40P36534 MSH2YOL090W 2895 nt3.24□□□□□ -1.89
MRPL40P36534 ECM18YDR125C 1362 nt3.24□□□□□ -1.89
MRPL40P36534 CHS3YBR023C 3498 nt3.24□□□□□ -1.89
MRPL40P36534 GCN1YGL195W 8019 nt3.23□□□□□ -1.89
MRPL40P36534 UBP5YER144C 2418 nt3.23□□□□□ -1.89
MRPL40P36534 MON1YGL124C 1935 nt3.23□□□□□ -1.89
MRPL40P36534 YCR015CYCR015C 954 nt3.23□□□□□ -1.89
MRPL40P36534 YML096WYML096W 1578 nt3.23□□□□□ -1.89
MRPL40P36534 UBP8YMR223W 1416 nt3.23□□□□□ -1.89
MRPL40P36534 SSN8YNL025C 972 nt3.23□□□□□ -1.89
MRPL40P36534 YTA7YGR270W 4140 nt3.22□□□□□ -1.89
MRPL40P36534 GPP2YER062C 753 nt3.22□□□□□ -1.89
MRPL40P36534 PAN5YHR063C 1140 nt3.22□□□□□ -1.89
MRPL40P36534 NIT3YLR351C 876 nt3.22□□□□□ -1.89
MRPL40P36534 YNL162W-AYNL162W-A 219 nt3.22□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 28.8 ms