Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC26.56■■□□□ 1.84
PDE6BP35913 AC091874.3-201ENST00000512672 1195 ntBASIC26.56■■□□□ 1.84
PDE6BP35913 BET1L-207ENST00000529614 560 ntTSL 5 BASIC26.56■■□□□ 1.84
PDE6BP35913 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
PDE6BP35913 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC26.56■■□□□ 1.84
PDE6BP35913 AC008175.2-201ENST00000612840 297 ntBASIC26.56■■□□□ 1.84
PDE6BP35913 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
PDE6BP35913 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.56■■□□□ 1.84
PDE6BP35913 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PDE6BP35913 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PDE6BP35913 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
PDE6BP35913 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC26.55■■□□□ 1.84
PDE6BP35913 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PDE6BP35913 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PDE6BP35913 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PDE6BP35913 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC26.55■■□□□ 1.84
PDE6BP35913 MMAB-206ENST00000540016 945 ntTSL 3 BASIC26.55■■□□□ 1.84
PDE6BP35913 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC26.55■■□□□ 1.84
PDE6BP35913 AC006058.3-201ENST00000606217 1069 ntBASIC26.55■■□□□ 1.84
PDE6BP35913 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PDE6BP35913 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PDE6BP35913 LINC00526-201ENST00000581067 1875 ntBASIC26.55■■□□□ 1.84
PDE6BP35913 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PDE6BP35913 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC26.54■■□□□ 1.84
PDE6BP35913 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
PDE6BP35913 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PDE6BP35913 BAALC-201ENST00000297574 801 ntTSL 3 BASIC26.54■■□□□ 1.84
PDE6BP35913 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
PDE6BP35913 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
PDE6BP35913 ISCU-212ENST00000547005 795 ntTSL 3 BASIC26.54■■□□□ 1.84
PDE6BP35913 AC142381.4-202ENST00000563973 229 ntBASIC26.54■■□□□ 1.84
PDE6BP35913 AL162412.1-201ENST00000567129 965 ntBASIC26.54■■□□□ 1.84
PDE6BP35913 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC26.54■■□□□ 1.84
PDE6BP35913 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC26.54■■□□□ 1.84
PDE6BP35913 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
PDE6BP35913 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
PDE6BP35913 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC26.53■■□□□ 1.84
PDE6BP35913 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC26.53■■□□□ 1.84
PDE6BP35913 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
PDE6BP35913 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PDE6BP35913 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PDE6BP35913 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PDE6BP35913 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC26.53■■□□□ 1.84
PDE6BP35913 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PDE6BP35913 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC26.53■■□□□ 1.84
PDE6BP35913 AL158047.1-201ENST00000445918 881 ntBASIC26.53■■□□□ 1.84
PDE6BP35913 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC26.53■■□□□ 1.84
PDE6BP35913 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
PDE6BP35913 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC26.53■■□□□ 1.84
PDE6BP35913 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
PDE6BP35913 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
PDE6BP35913 AC092068.2-201ENST00000590491 1708 ntBASIC26.53■■□□□ 1.84
PDE6BP35913 ANOS2P-203ENST00000472227 1816 ntBASIC26.53■■□□□ 1.84
PDE6BP35913 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PDE6BP35913 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
PDE6BP35913 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
PDE6BP35913 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PDE6BP35913 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PDE6BP35913 AC128676.1-201ENST00000454392 318 ntBASIC26.52■■□□□ 1.84
PDE6BP35913 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
PDE6BP35913 AC010980.2-201ENST00000587099 1412 ntBASIC26.52■■□□□ 1.84
PDE6BP35913 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
PDE6BP35913 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC26.52■■□□□ 1.84
PDE6BP35913 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC26.52■■□□□ 1.84
PDE6BP35913 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
PDE6BP35913 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
PDE6BP35913 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
PDE6BP35913 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC26.51■■□□□ 1.83
PDE6BP35913 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PDE6BP35913 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PDE6BP35913 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PDE6BP35913 POU5F1P4-201ENST00000413175 1085 ntBASIC26.51■■□□□ 1.83
PDE6BP35913 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC26.51■■□□□ 1.83
PDE6BP35913 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PDE6BP35913 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC26.51■■□□□ 1.83
PDE6BP35913 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC26.51■■□□□ 1.83
PDE6BP35913 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC26.5■■□□□ 1.83
PDE6BP35913 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC26.5■■□□□ 1.83
PDE6BP35913 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PDE6BP35913 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PDE6BP35913 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PDE6BP35913 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC26.5■■□□□ 1.83
PDE6BP35913 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC26.5■■□□□ 1.83
PDE6BP35913 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC26.5■■□□□ 1.83
PDE6BP35913 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC26.5■■□□□ 1.83
PDE6BP35913 RPS2P4-201ENST00000476944 856 ntBASIC26.5■■□□□ 1.83
PDE6BP35913 AL591742.1-201ENST00000604433 565 ntBASIC26.5■■□□□ 1.83
PDE6BP35913 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
PDE6BP35913 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PDE6BP35913 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC26.5■■□□□ 1.83
PDE6BP35913 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PDE6BP35913 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC26.49■■□□□ 1.83
PDE6BP35913 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC26.49■■□□□ 1.83
PDE6BP35913 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PDE6BP35913 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
PDE6BP35913 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC26.49■■□□□ 1.83
PDE6BP35913 AL596275.1-201ENST00000423464 877 ntBASIC26.49■■□□□ 1.83
PDE6BP35913 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC26.49■■□□□ 1.83
PDE6BP35913 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
PDE6BP35913 INO80E-214ENST00000620599 515 ntTSL 2 BASIC26.49■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms