Protein–RNA interactions for Protein: P33400

RIM101, pH-response transcription factor pacC/RIM101, yeastyeast

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RIM101P33400 HSP82YPL240C 2130 nt7.67□□□□□ -1.18
RIM101P33400 SIA1YOR137C 1869 nt7.67□□□□□ -1.18
RIM101P33400 COX4YGL187C 468 nt7.67□□□□□ -1.18
RIM101P33400 YJL160CYJL160C 864 nt7.67□□□□□ -1.18
RIM101P33400 IDP2YLR174W 1239 nt7.67□□□□□ -1.18
RIM101P33400 PGA3YML125C 939 nt7.67□□□□□ -1.18
RIM101P33400 RIM9YMR063W 720 nt7.67□□□□□ -1.18
RIM101P33400 RKI1YOR095C 777 nt7.67□□□□□ -1.18
RIM101P33400 YBR085C-AYBR085C-A 258 nt7.67□□□□□ -1.18
RIM101P33400 ULA1YPL003W 1389 nt7.67□□□□□ -1.18
RIM101P33400 YBR241CYBR241C 1467 nt7.67□□□□□ -1.18
RIM101P33400 RTR2YDR066C 591 nt7.66□□□□□ -1.18
RIM101P33400 YDR133CYDR133C 336 nt7.66□□□□□ -1.18
RIM101P33400 YHL034W-AYHL034W-A 462 nt7.66□□□□□ -1.18
RIM101P33400 PIR1YKL164C 1026 nt7.66□□□□□ -1.18
RIM101P33400 YLR157W-EYLR157W-E 165 nt7.66□□□□□ -1.18
RIM101P33400 VPS69YPR087W 321 nt7.66□□□□□ -1.18
RIM101P33400 SPE1YKL184W 1401 nt7.65□□□□□ -1.18
RIM101P33400 YMR221CYMR221C 1515 nt7.65□□□□□ -1.18
RIM101P33400 YPT11YNL304W 1254 nt7.65□□□□□ -1.18
RIM101P33400 ZEO1YOL109W 342 nt7.65□□□□□ -1.18
RIM101P33400 RMI1YPL024W 726 nt7.65□□□□□ -1.18
RIM101P33400 YAR1YPL239W 603 nt7.65□□□□□ -1.18
RIM101P33400 SIS2YKR072C 1689 nt7.64□□□□□ -1.19
RIM101P33400 VMA2YBR127C 1554 nt7.64□□□□□ -1.19
RIM101P33400 AVT7YIL088C 1473 nt7.64□□□□□ -1.19
RIM101P33400 YTP1YNL237W 1380 nt7.64□□□□□ -1.19
RIM101P33400 LAP3YNL239W 1365 nt7.64□□□□□ -1.19
RIM101P33400 RCF1YML030W 480 nt7.64□□□□□ -1.19
RIM101P33400 RPL9BYNL067W 576 nt7.64□□□□□ -1.19
RIM101P33400 MRPL51YPR100W 423 nt7.64□□□□□ -1.19
RIM101P33400 GIP1YBR045C 1920 nt7.64□□□□□ -1.19
RIM101P33400 FMP25YLR077W 1752 nt7.64□□□□□ -1.19
RIM101P33400 PPQ1YPL179W 1650 nt7.63□□□□□ -1.19
RIM101P33400 ATG4YNL223W 1485 nt7.63□□□□□ -1.19
RIM101P33400 VBA2YBR293W 1425 nt7.63□□□□□ -1.19
RIM101P33400 VPS9YML097C 1356 nt7.63□□□□□ -1.19
RIM101P33400 SMC5YOL034W 3282 nt7.63□□□□□ -1.19
RIM101P33400 RAD6YGL058W 519 nt7.63□□□□□ -1.19
RIM101P33400 COA4YLR218C 453 nt7.63□□□□□ -1.19
RIM101P33400 YPR123CYPR123C 435 nt7.63□□□□□ -1.19
RIM101P33400 PEX29YDR479C 1665 nt7.63□□□□□ -1.19
RIM101P33400 STP2YHR006W 1626 nt7.63□□□□□ -1.19
RIM101P33400 GLN3YER040W 2193 nt7.62□□□□□ -1.19
RIM101P33400 HOM2YDR158W 1098 nt7.62□□□□□ -1.19
RIM101P33400 YDR274CYDR274C 372 nt7.62□□□□□ -1.19
RIM101P33400 PKR1YMR123W 369 nt7.62□□□□□ -1.19
RIM101P33400 MTL1YGR023W 1656 nt7.62□□□□□ -1.19
RIM101P33400 HPR1YDR138W 2259 nt7.62□□□□□ -1.19
RIM101P33400 EMW1YNL313C 2715 nt7.61□□□□□ -1.19
RIM101P33400 RBA50YDR527W 1320 nt7.61□□□□□ -1.19
RIM101P33400 RPS14AYCR031C 414 nt7.61□□□□□ -1.19
RIM101P33400 AHA1YDR214W 1053 nt7.61□□□□□ -1.19
RIM101P33400 HOM3YER052C 1584 nt7.61□□□□□ -1.19
RIM101P33400 ENT2YLR206W 1842 nt7.61□□□□□ -1.19
RIM101P33400 GWT1YJL091C 1473 nt7.61□□□□□ -1.19
RIM101P33400 RVB1YDR190C 1392 nt7.6□□□□□ -1.19
RIM101P33400 SMX2YFL017W-A 234 nt7.6□□□□□ -1.19
RIM101P33400 FBA1YKL060C 1080 nt7.6□□□□□ -1.19
RIM101P33400 GTT2YLL060C 702 nt7.6□□□□□ -1.19
RIM101P33400 HXT5YHR096C 1779 nt7.6□□□□□ -1.19
RIM101P33400 STN1YDR082W 1485 nt7.6□□□□□ -1.19
RIM101P33400 ALG11YNL048W 1647 nt7.6□□□□□ -1.19
RIM101P33400 PCS60YBR222C 1632 nt7.6□□□□□ -1.19
RIM101P33400 SET5YHR207C 1581 nt7.59□□□□□ -1.19
RIM101P33400 MSS1YMR023C 1581 nt7.59□□□□□ -1.19
RIM101P33400 CDC6YJL194W 1542 nt7.59□□□□□ -1.19
RIM101P33400 WIP1YDR374W-A 270 nt7.59□□□□□ -1.19
RIM101P33400 SPR6YER115C 576 nt7.59□□□□□ -1.19
RIM101P33400 YGL260WYGL260W 231 nt7.59□□□□□ -1.19
RIM101P33400 YHR214C-EYHR214C-E 300 nt7.59□□□□□ -1.19
RIM101P33400 YIL066W-AYIL066W-A 444 nt7.59□□□□□ -1.19
RIM101P33400 RNA170RNA170 169 nt7.59□□□□□ -1.19
RIM101P33400 RTC2YBR147W 891 nt7.59□□□□□ -1.19
RIM101P33400 NOT5YPR072W 1683 nt7.59□□□□□ -1.19
RIM101P33400 LST4YKL176C 2487 nt7.58□□□□□ -1.2
RIM101P33400 tL(UAA)B1tL(UAA)B1 84 nt7.58□□□□□ -1.2
RIM101P33400 tL(UAA)B2tL(UAA)B2 84 nt7.58□□□□□ -1.2
RIM101P33400 tL(UAA)DtL(UAA)D 84 nt7.58□□□□□ -1.2
RIM101P33400 SUP51tL(UAA)J 84 nt7.58□□□□□ -1.2
RIM101P33400 tL(UAA)KtL(UAA)K 84 nt7.58□□□□□ -1.2
RIM101P33400 tL(UAA)LtL(UAA)L 84 nt7.58□□□□□ -1.2
RIM101P33400 tL(UAA)NtL(UAA)N 84 nt7.58□□□□□ -1.2
RIM101P33400 GOS1YHL031C 672 nt7.58□□□□□ -1.2
RIM101P33400 MRPL50YNR022C 420 nt7.58□□□□□ -1.2
RIM101P33400 snR42snR42 351 nt7.58□□□□□ -1.2
RIM101P33400 YLL066CYLL066C 3618 nt7.58□□□□□ -1.2
RIM101P33400 GPI17YDR434W 1605 nt7.58□□□□□ -1.2
RIM101P33400 YPS6YIR039C 1614 nt7.58□□□□□ -1.2
RIM101P33400 KAR9YPL269W 1935 nt7.58□□□□□ -1.2
RIM101P33400 HSP78YDR258C 2436 nt7.58□□□□□ -1.2
RIM101P33400 HXT15YDL245C 1704 nt7.58□□□□□ -1.2
RIM101P33400 HXT16YJR158W 1704 nt7.58□□□□□ -1.2
RIM101P33400 TOS1YBR162C 1368 nt7.58□□□□□ -1.2
RIM101P33400 ALT2YDR111C 1524 nt7.57□□□□□ -1.2
RIM101P33400 RRI2YOL117W 1938 nt7.57□□□□□ -1.2
RIM101P33400 YFL063WYFL063W 456 nt7.57□□□□□ -1.2
RIM101P33400 MLC1YGL106W 450 nt7.57□□□□□ -1.2
RIM101P33400 YGL193CYGL193C 312 nt7.57□□□□□ -1.2
RIM101P33400 YAL031W-AYAL031W-A 309 nt7.57□□□□□ -1.2
Retrieved 100 of 7,029 protein–RNA pairs in 15.9 ms