Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.69■□□□□ 0.74
ABCD3P28288 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.69■□□□□ 0.74
ABCD3P28288 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
ABCD3P28288 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.69■□□□□ 0.74
ABCD3P28288 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ABCD3P28288 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ABCD3P28288 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
ABCD3P28288 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ABCD3P28288 AC026471.6-201ENST00000622954 1905 ntBASIC19.68■□□□□ 0.74
ABCD3P28288 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ABCD3P28288 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.68■□□□□ 0.74
ABCD3P28288 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ABCD3P28288 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.68■□□□□ 0.74
ABCD3P28288 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.68■□□□□ 0.74
ABCD3P28288 AC079140.4-201ENST00000507448 529 ntBASIC19.68■□□□□ 0.74
ABCD3P28288 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.68■□□□□ 0.74
ABCD3P28288 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.68■□□□□ 0.74
ABCD3P28288 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
ABCD3P28288 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ABCD3P28288 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ABCD3P28288 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ABCD3P28288 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
ABCD3P28288 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ABCD3P28288 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ABCD3P28288 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ABCD3P28288 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.67■□□□□ 0.74
ABCD3P28288 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ABCD3P28288 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ABCD3P28288 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ABCD3P28288 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ABCD3P28288 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ABCD3P28288 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.67■□□□□ 0.74
ABCD3P28288 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ABCD3P28288 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ABCD3P28288 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ABCD3P28288 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ABCD3P28288 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
ABCD3P28288 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.66■□□□□ 0.74
ABCD3P28288 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.66■□□□□ 0.74
ABCD3P28288 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.66■□□□□ 0.74
ABCD3P28288 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.66■□□□□ 0.74
ABCD3P28288 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.66■□□□□ 0.74
ABCD3P28288 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
ABCD3P28288 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.66■□□□□ 0.74
ABCD3P28288 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ABCD3P28288 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
ABCD3P28288 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.65■□□□□ 0.74
ABCD3P28288 AC003102.1-202ENST00000563394 1796 ntBASIC19.65■□□□□ 0.74
ABCD3P28288 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ABCD3P28288 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ABCD3P28288 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.65■□□□□ 0.74
ABCD3P28288 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
ABCD3P28288 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.65■□□□□ 0.74
ABCD3P28288 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ABCD3P28288 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ABCD3P28288 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.65■□□□□ 0.74
ABCD3P28288 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ABCD3P28288 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ABCD3P28288 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.65■□□□□ 0.74
ABCD3P28288 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ABCD3P28288 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ABCD3P28288 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.65■□□□□ 0.74
ABCD3P28288 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
ABCD3P28288 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
ABCD3P28288 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ABCD3P28288 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
ABCD3P28288 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ABCD3P28288 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ABCD3P28288 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.64■□□□□ 0.74
ABCD3P28288 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.64■□□□□ 0.74
ABCD3P28288 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.64■□□□□ 0.73
ABCD3P28288 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ABCD3P28288 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.64■□□□□ 0.73
ABCD3P28288 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
ABCD3P28288 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.64■□□□□ 0.73
ABCD3P28288 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ABCD3P28288 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ABCD3P28288 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ABCD3P28288 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ABCD3P28288 KRT87P-202ENST00000534226 1464 ntBASIC19.64■□□□□ 0.73
ABCD3P28288 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ABCD3P28288 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ABCD3P28288 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ABCD3P28288 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ABCD3P28288 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ABCD3P28288 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
ABCD3P28288 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ABCD3P28288 AC010542.4-201ENST00000563151 1910 ntBASIC19.63■□□□□ 0.73
ABCD3P28288 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.63■□□□□ 0.73
ABCD3P28288 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ABCD3P28288 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.63■□□□□ 0.73
ABCD3P28288 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
ABCD3P28288 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.63■□□□□ 0.73
ABCD3P28288 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ABCD3P28288 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ABCD3P28288 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.63■□□□□ 0.73
ABCD3P28288 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.63■□□□□ 0.73
ABCD3P28288 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
ABCD3P28288 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.63■□□□□ 0.73
ABCD3P28288 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms