Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.69■□□□□ 0.58
ATF1P18846 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATF1P18846 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATF1P18846 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATF1P18846 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.69■□□□□ 0.58
ATF1P18846 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATF1P18846 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ATF1P18846 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATF1P18846 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ATF1P18846 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATF1P18846 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATF1P18846 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATF1P18846 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATF1P18846 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATF1P18846 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATF1P18846 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATF1P18846 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.69■□□□□ 0.58
ATF1P18846 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATF1P18846 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.68■□□□□ 0.58
ATF1P18846 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.68■□□□□ 0.58
ATF1P18846 AC026471.6-201ENST00000622954 1905 ntBASIC18.68■□□□□ 0.58
ATF1P18846 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATF1P18846 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATF1P18846 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATF1P18846 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATF1P18846 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
ATF1P18846 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.68■□□□□ 0.58
ATF1P18846 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATF1P18846 AL356740.2-201ENST00000601559 647 ntBASIC18.68■□□□□ 0.58
ATF1P18846 pRNA.6-201ENST00000610482 90 ntBASIC18.68■□□□□ 0.58
ATF1P18846 pRNA.5-201ENST00000612139 90 ntBASIC18.68■□□□□ 0.58
ATF1P18846 pRNA.11-201ENST00000618423 90 ntBASIC18.68■□□□□ 0.58
ATF1P18846 pRNA.13-201ENST00000619112 90 ntBASIC18.68■□□□□ 0.58
ATF1P18846 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATF1P18846 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATF1P18846 AC133637.1-201ENST00000624115 1537 ntBASIC18.68■□□□□ 0.58
ATF1P18846 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.68■□□□□ 0.58
ATF1P18846 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
ATF1P18846 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.67■□□□□ 0.58
ATF1P18846 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATF1P18846 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATF1P18846 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATF1P18846 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATF1P18846 AC006455.2-201ENST00000429931 906 ntBASIC18.67■□□□□ 0.58
ATF1P18846 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.67■□□□□ 0.58
ATF1P18846 AL035685.1-201ENST00000636663 812 ntBASIC18.67■□□□□ 0.58
ATF1P18846 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATF1P18846 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATF1P18846 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATF1P18846 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATF1P18846 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.66■□□□□ 0.58
ATF1P18846 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATF1P18846 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATF1P18846 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
ATF1P18846 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
ATF1P18846 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
ATF1P18846 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.66■□□□□ 0.58
ATF1P18846 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.66■□□□□ 0.58
ATF1P18846 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.66■□□□□ 0.58
ATF1P18846 AL031602.1-201ENST00000633169 911 ntBASIC18.66■□□□□ 0.58
ATF1P18846 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.66■□□□□ 0.58
ATF1P18846 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATF1P18846 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.66■□□□□ 0.58
ATF1P18846 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.66■□□□□ 0.58
ATF1P18846 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
ATF1P18846 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATF1P18846 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATF1P18846 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ATF1P18846 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATF1P18846 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATF1P18846 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATF1P18846 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.65■□□□□ 0.58
ATF1P18846 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATF1P18846 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.65■□□□□ 0.58
ATF1P18846 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.65■□□□□ 0.58
ATF1P18846 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.65■□□□□ 0.58
ATF1P18846 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.65■□□□□ 0.58
ATF1P18846 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.65■□□□□ 0.58
ATF1P18846 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATF1P18846 AC099791.2-201ENST00000605725 427 ntBASIC18.65■□□□□ 0.58
ATF1P18846 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATF1P18846 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATF1P18846 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
ATF1P18846 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATF1P18846 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATF1P18846 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATF1P18846 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ATF1P18846 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.64■□□□□ 0.57
ATF1P18846 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATF1P18846 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATF1P18846 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.64■□□□□ 0.57
ATF1P18846 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ATF1P18846 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATF1P18846 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATF1P18846 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ATF1P18846 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATF1P18846 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.64■□□□□ 0.57
ATF1P18846 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATF1P18846 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.64■□□□□ 0.57
ATF1P18846 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms