Protein–RNA interactions for Protein: P0CX68

TY1A-LR1, Transposon Ty1-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-LR1P0CX68 TSL1YML100W 3297 nt5.78□□□□□ -1.48
TY1A-LR1P0CX68 PSA1YDL055C 1086 nt5.78□□□□□ -1.48
TY1A-LR1P0CX68 HIS1YER055C 894 nt5.78□□□□□ -1.48
TY1A-LR1P0CX68 RPS24BYIL069C 408 nt5.78□□□□□ -1.48
TY1A-LR1P0CX68 YLR269CYLR269C 351 nt5.78□□□□□ -1.48
TY1A-LR1P0CX68 MED11YMR112C 396 nt5.78□□□□□ -1.48
TY1A-LR1P0CX68 YPL108WYPL108W 507 nt5.78□□□□□ -1.48
TY1A-LR1P0CX68 VPS69YPR087W 321 nt5.78□□□□□ -1.48
TY1A-LR1P0CX68 SEC2YNL272C 2280 nt5.78□□□□□ -1.48
TY1A-LR1P0CX68 FUS2YMR232W 2034 nt5.77□□□□□ -1.49
TY1A-LR1P0CX68 NDT80YHR124W 1884 nt5.77□□□□□ -1.49
TY1A-LR1P0CX68 MUB1YMR100W 1863 nt5.77□□□□□ -1.49
TY1A-LR1P0CX68 HXT15YDL245C 1704 nt5.77□□□□□ -1.49
TY1A-LR1P0CX68 MSM1YGR171C 1728 nt5.77□□□□□ -1.49
TY1A-LR1P0CX68 HXT16YJR158W 1704 nt5.77□□□□□ -1.49
TY1A-LR1P0CX68 YDL094CYDL094C 510 nt5.77□□□□□ -1.49
TY1A-LR1P0CX68 SKP1YDR328C 585 nt5.77□□□□□ -1.49
TY1A-LR1P0CX68 YOR200WYOR200W 399 nt5.77□□□□□ -1.49
TY1A-LR1P0CX68 DSC3YOR223W 879 nt5.77□□□□□ -1.49
TY1A-LR1P0CX68 YPR096CYPR096C 303 nt5.77□□□□□ -1.49
TY1A-LR1P0CX68 PSP2YML017W 1782 nt5.77□□□□□ -1.49
TY1A-LR1P0CX68 ALG11YNL048W 1647 nt5.77□□□□□ -1.49
TY1A-LR1P0CX68 RIM21YNL294C 1602 nt5.77□□□□□ -1.49
TY1A-LR1P0CX68 RIM4YHL024W 2142 nt5.77□□□□□ -1.49
TY1A-LR1P0CX68 FAT3YKL187C 2253 nt5.76□□□□□ -1.49
TY1A-LR1P0CX68 YPS7YDR349C 1791 nt5.76□□□□□ -1.49
TY1A-LR1P0CX68 MPP10YJR002W 1782 nt5.76□□□□□ -1.49
TY1A-LR1P0CX68 NTF2YER009W 378 nt5.76□□□□□ -1.49
TY1A-LR1P0CX68 YFL013W-AYFL013W-A 804 nt5.76□□□□□ -1.49
TY1A-LR1P0CX68 MTM1YGR257C 1101 nt5.76□□□□□ -1.49
TY1A-LR1P0CX68 PHS1YJL097W 654 nt5.76□□□□□ -1.49
TY1A-LR1P0CX68 PIR1YKL164C 1026 nt5.76□□□□□ -1.49
TY1A-LR1P0CX68 YKR041WYKR041W 753 nt5.76□□□□□ -1.49
TY1A-LR1P0CX68 VPS63YLR261C 327 nt5.76□□□□□ -1.49
TY1A-LR1P0CX68 SPG4YMR107W 348 nt5.76□□□□□ -1.49
TY1A-LR1P0CX68 TIM18YOR297C 579 nt5.76□□□□□ -1.49
TY1A-LR1P0CX68 MRPL51YPR100W 423 nt5.76□□□□□ -1.49
TY1A-LR1P0CX68 PDB1YBR221C 1101 nt5.76□□□□□ -1.49
TY1A-LR1P0CX68 YEH2YLR020C 1617 nt5.76□□□□□ -1.49
TY1A-LR1P0CX68 SNF12YNR023W 1701 nt5.76□□□□□ -1.49
TY1A-LR1P0CX68 TKL1YPR074C 2043 nt5.75□□□□□ -1.49
TY1A-LR1P0CX68 VNX1YNL321W 2727 nt5.75□□□□□ -1.49
TY1A-LR1P0CX68 RTR2YDR066C 591 nt5.75□□□□□ -1.49
TY1A-LR1P0CX68 SDH6YDR379C-A 240 nt5.75□□□□□ -1.49
TY1A-LR1P0CX68 YKL068W-AYKL068W-A 237 nt5.75□□□□□ -1.49
TY1A-LR1P0CX68 SHE2YKL130C 741 nt5.75□□□□□ -1.49
TY1A-LR1P0CX68 CCW12YLR110C 402 nt5.75□□□□□ -1.49
TY1A-LR1P0CX68 YMR316C-AYMR316C-A 312 nt5.75□□□□□ -1.49
TY1A-LR1P0CX68 BIL1YOR304C-A 231 nt5.75□□□□□ -1.49
TY1A-LR1P0CX68 RPL43AYPR043W 279 nt5.75□□□□□ -1.49
TY1A-LR1P0CX68 NCS2YNL119W 1482 nt5.75□□□□□ -1.49
TY1A-LR1P0CX68 ICP55YER078C 1536 nt5.74□□□□□ -1.49
TY1A-LR1P0CX68 ARP2YDL029W 1176 nt5.74□□□□□ -1.49
TY1A-LR1P0CX68 YDR090CYDR090C 933 nt5.74□□□□□ -1.49
TY1A-LR1P0CX68 ATP5YDR298C 639 nt5.74□□□□□ -1.49
TY1A-LR1P0CX68 YDR524C-AYDR524C-A 120 nt5.74□□□□□ -1.49
TY1A-LR1P0CX68 YGR053CYGR053C 852 nt5.74□□□□□ -1.49
TY1A-LR1P0CX68 CPD1YGR247W 720 nt5.74□□□□□ -1.49
TY1A-LR1P0CX68 RGI2YIL057C 495 nt5.74□□□□□ -1.49
TY1A-LR1P0CX68 GCN3YKR026C 918 nt5.74□□□□□ -1.49
TY1A-LR1P0CX68 RPP0YLR340W 939 nt5.74□□□□□ -1.49
TY1A-LR1P0CX68 CUE4YML101C 354 nt5.74□□□□□ -1.49
TY1A-LR1P0CX68 RIM9YMR063W 720 nt5.74□□□□□ -1.49
TY1A-LR1P0CX68 YAR1YPL239W 603 nt5.74□□□□□ -1.49
TY1A-LR1P0CX68 PEX29YDR479C 1665 nt5.74□□□□□ -1.49
TY1A-LR1P0CX68 HXT5YHR096C 1779 nt5.74□□□□□ -1.49
TY1A-LR1P0CX68 PMA1YGL008C 2757 nt5.74□□□□□ -1.49
TY1A-LR1P0CX68 YOR365CYOR365C 2112 nt5.74□□□□□ -1.49
TY1A-LR1P0CX68 ILV1YER086W 1731 nt5.74□□□□□ -1.49
TY1A-LR1P0CX68 RPN6YDL097C 1305 nt5.74□□□□□ -1.49
TY1A-LR1P0CX68 YHR045WYHR045W 1683 nt5.73□□□□□ -1.49
TY1A-LR1P0CX68 CDC48YDL126C 2508 nt5.73□□□□□ -1.49
TY1A-LR1P0CX68 KEL1YHR158C 3495 nt5.73□□□□□ -1.49
TY1A-LR1P0CX68 TEF1YPR080W 1377 nt5.73□□□□□ -1.49
TY1A-LR1P0CX68 TEF2YBR118W 1377 nt5.73□□□□□ -1.49
TY1A-LR1P0CX68 YDL068WYDL068W 330 nt5.73□□□□□ -1.49
TY1A-LR1P0CX68 SUF5tG(CCC)O 72 nt5.73□□□□□ -1.49
TY1A-LR1P0CX68 HAC1YFL031W 717 nt5.73□□□□□ -1.49
TY1A-LR1P0CX68 YGL193CYGL193C 312 nt5.73□□□□□ -1.49
TY1A-LR1P0CX68 FCF2YLR051C 654 nt5.73□□□□□ -1.49
TY1A-LR1P0CX68 YAR075WYAR075W 474 nt5.73□□□□□ -1.49
TY1A-LR1P0CX68 PGA3YML125C 939 nt5.73□□□□□ -1.49
TY1A-LR1P0CX68 MKK2YPL140C 1521 nt5.73□□□□□ -1.49
TY1A-LR1P0CX68 FMP25YLR077W 1752 nt5.72□□□□□ -1.49
TY1A-LR1P0CX68 MIH1YMR036C 1665 nt5.72□□□□□ -1.49
TY1A-LR1P0CX68 RVB1YDR190C 1392 nt5.72□□□□□ -1.49
TY1A-LR1P0CX68 TGA1tA(UGC)A 73 nt5.72□□□□□ -1.49
TY1A-LR1P0CX68 tA(UGC)EtA(UGC)E 73 nt5.72□□□□□ -1.49
TY1A-LR1P0CX68 tA(UGC)GtA(UGC)G 73 nt5.72□□□□□ -1.49
TY1A-LR1P0CX68 tA(UGC)LtA(UGC)L 73 nt5.72□□□□□ -1.49
TY1A-LR1P0CX68 tA(UGC)OtA(UGC)O 73 nt5.72□□□□□ -1.49
TY1A-LR1P0CX68 QCR2YPR191W 1107 nt5.72□□□□□ -1.49
TY1A-LR1P0CX68 YMR221CYMR221C 1515 nt5.72□□□□□ -1.49
TY1A-LR1P0CX68 YGR117CYGR117C 1431 nt5.72□□□□□ -1.49
TY1A-LR1P0CX68 PUF2YPR042C 3228 nt5.72□□□□□ -1.49
TY1A-LR1P0CX68 AGA1YNR044W 2178 nt5.72□□□□□ -1.49
TY1A-LR1P0CX68 HOM3YER052C 1584 nt5.72□□□□□ -1.49
TY1A-LR1P0CX68 SEC27YGL137W 2670 nt5.71□□□□□ -1.49
TY1A-LR1P0CX68 RPS11AYDR025W 471 nt5.71□□□□□ -1.5
TY1A-LR1P0CX68 HOM2YDR158W 1098 nt5.71□□□□□ -1.5
Retrieved 100 of 7,029 protein–RNA pairs in 19.6 ms