Protein–RNA interactions for Protein: P0CJ79

ZNF888, Zinc finger protein 888, humanhuman

Predicted RBP Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF888P0CJ79 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF888P0CJ79 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ZNF888P0CJ79 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
ZNF888P0CJ79 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ZNF888P0CJ79 AC026271.2-201ENST00000428091 497 ntBASIC20.3■□□□□ 0.84
ZNF888P0CJ79 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.3■□□□□ 0.84
ZNF888P0CJ79 TERF1P2-201ENST00000583350 1212 ntBASIC20.3■□□□□ 0.84
ZNF888P0CJ79 AC087623.3-201ENST00000607047 1098 ntBASIC20.3■□□□□ 0.84
ZNF888P0CJ79 MIR6821-201ENST00000617625 74 ntBASIC20.3■□□□□ 0.84
ZNF888P0CJ79 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF888P0CJ79 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF888P0CJ79 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF888P0CJ79 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
ZNF888P0CJ79 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF888P0CJ79 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF888P0CJ79 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF888P0CJ79 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF888P0CJ79 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF888P0CJ79 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.29■□□□□ 0.84
ZNF888P0CJ79 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.29■□□□□ 0.84
ZNF888P0CJ79 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF888P0CJ79 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
ZNF888P0CJ79 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF888P0CJ79 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF888P0CJ79 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF888P0CJ79 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF888P0CJ79 AC010542.4-201ENST00000563151 1910 ntBASIC20.28■□□□□ 0.84
ZNF888P0CJ79 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF888P0CJ79 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF888P0CJ79 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.28■□□□□ 0.84
ZNF888P0CJ79 KRT18P14-201ENST00000534205 1250 ntBASIC20.28■□□□□ 0.84
ZNF888P0CJ79 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.28■□□□□ 0.84
ZNF888P0CJ79 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.28■□□□□ 0.84
ZNF888P0CJ79 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.28■□□□□ 0.84
ZNF888P0CJ79 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.28■□□□□ 0.84
ZNF888P0CJ79 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF888P0CJ79 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF888P0CJ79 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.28■□□□□ 0.84
ZNF888P0CJ79 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF888P0CJ79 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
ZNF888P0CJ79 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.84
ZNF888P0CJ79 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF888P0CJ79 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF888P0CJ79 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF888P0CJ79 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.27■□□□□ 0.84
ZNF888P0CJ79 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.27■□□□□ 0.84
ZNF888P0CJ79 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF888P0CJ79 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF888P0CJ79 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
ZNF888P0CJ79 AC003102.1-202ENST00000563394 1796 ntBASIC20.26■□□□□ 0.83
ZNF888P0CJ79 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.26■□□□□ 0.83
ZNF888P0CJ79 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF888P0CJ79 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.26■□□□□ 0.83
ZNF888P0CJ79 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.26■□□□□ 0.83
ZNF888P0CJ79 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
ZNF888P0CJ79 AC079140.4-201ENST00000507448 529 ntBASIC20.26■□□□□ 0.83
ZNF888P0CJ79 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.26■□□□□ 0.83
ZNF888P0CJ79 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.26■□□□□ 0.83
ZNF888P0CJ79 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
ZNF888P0CJ79 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF888P0CJ79 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF888P0CJ79 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF888P0CJ79 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.26■□□□□ 0.83
ZNF888P0CJ79 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF888P0CJ79 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.25■□□□□ 0.83
ZNF888P0CJ79 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF888P0CJ79 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ZNF888P0CJ79 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF888P0CJ79 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
ZNF888P0CJ79 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.25■□□□□ 0.83
ZNF888P0CJ79 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF888P0CJ79 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.25■□□□□ 0.83
ZNF888P0CJ79 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.25■□□□□ 0.83
ZNF888P0CJ79 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
ZNF888P0CJ79 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF888P0CJ79 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF888P0CJ79 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.25■□□□□ 0.83
ZNF888P0CJ79 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF888P0CJ79 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.25■□□□□ 0.83
ZNF888P0CJ79 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF888P0CJ79 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF888P0CJ79 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF888P0CJ79 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF888P0CJ79 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.24■□□□□ 0.83
ZNF888P0CJ79 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ZNF888P0CJ79 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ZNF888P0CJ79 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.24■□□□□ 0.83
ZNF888P0CJ79 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF888P0CJ79 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.24■□□□□ 0.83
ZNF888P0CJ79 DUX4L2-201ENST00000561772 1275 ntBASIC20.24■□□□□ 0.83
ZNF888P0CJ79 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.24■□□□□ 0.83
ZNF888P0CJ79 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.24■□□□□ 0.83
ZNF888P0CJ79 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ZNF888P0CJ79 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF888P0CJ79 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.24■□□□□ 0.83
ZNF888P0CJ79 DUX4L6-201ENST00000626483 1275 ntBASIC20.24■□□□□ 0.83
ZNF888P0CJ79 DUX4L1-201ENST00000627662 1275 ntBASIC20.24■□□□□ 0.83
ZNF888P0CJ79 DUX4L8-201ENST00000629013 1275 ntBASIC20.24■□□□□ 0.83
ZNF888P0CJ79 DUX4L3-201ENST00000630187 1275 ntBASIC20.24■□□□□ 0.83
ZNF888P0CJ79 DUX4L7-201ENST00000630678 1275 ntBASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms