Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL4A2P08572 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.78■■□□□ 1.08
COL4A2P08572 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
COL4A2P08572 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.78■■□□□ 1.08
COL4A2P08572 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL4A2P08572 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL4A2P08572 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
COL4A2P08572 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL4A2P08572 DUSP5P2-201ENST00000426873 1033 ntBASIC21.77■■□□□ 1.08
COL4A2P08572 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.77■■□□□ 1.08
COL4A2P08572 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.77■■□□□ 1.08
COL4A2P08572 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL4A2P08572 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL4A2P08572 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL4A2P08572 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.77■■□□□ 1.08
COL4A2P08572 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
COL4A2P08572 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL4A2P08572 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.77■■□□□ 1.08
COL4A2P08572 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.77■■□□□ 1.08
COL4A2P08572 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.77■■□□□ 1.08
COL4A2P08572 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.77■■□□□ 1.08
COL4A2P08572 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
COL4A2P08572 AC069236.1-201ENST00000604339 616 ntBASIC21.77■■□□□ 1.08
COL4A2P08572 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.77■■□□□ 1.08
COL4A2P08572 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
COL4A2P08572 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
COL4A2P08572 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL4A2P08572 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL4A2P08572 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.76■■□□□ 1.07
COL4A2P08572 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.76■■□□□ 1.07
COL4A2P08572 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.76■■□□□ 1.07
COL4A2P08572 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
COL4A2P08572 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL4A2P08572 RBM17P2-201ENST00000616397 1405 ntBASIC21.76■■□□□ 1.07
COL4A2P08572 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.76■■□□□ 1.07
COL4A2P08572 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
COL4A2P08572 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.76■■□□□ 1.07
COL4A2P08572 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
COL4A2P08572 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.75■■□□□ 1.07
COL4A2P08572 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL4A2P08572 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL4A2P08572 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.75■■□□□ 1.07
COL4A2P08572 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.75■■□□□ 1.07
COL4A2P08572 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL4A2P08572 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.75■■□□□ 1.07
COL4A2P08572 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.75■■□□□ 1.07
COL4A2P08572 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL4A2P08572 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL4A2P08572 AC091874.3-201ENST00000512672 1195 ntBASIC21.75■■□□□ 1.07
COL4A2P08572 AL162412.1-201ENST00000567129 965 ntBASIC21.75■■□□□ 1.07
COL4A2P08572 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
COL4A2P08572 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.75■■□□□ 1.07
COL4A2P08572 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL4A2P08572 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL4A2P08572 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
COL4A2P08572 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.74■■□□□ 1.07
COL4A2P08572 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.74■■□□□ 1.07
COL4A2P08572 GCSHP5-201ENST00000443090 522 ntBASIC21.74■■□□□ 1.07
COL4A2P08572 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.74■■□□□ 1.07
COL4A2P08572 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.74■■□□□ 1.07
COL4A2P08572 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.73■■□□□ 1.07
COL4A2P08572 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.73■■□□□ 1.07
COL4A2P08572 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL4A2P08572 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL4A2P08572 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.73■■□□□ 1.07
COL4A2P08572 KRT16P2-201ENST00000414673 1423 ntBASIC21.73■■□□□ 1.07
COL4A2P08572 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.73■■□□□ 1.07
COL4A2P08572 AC010980.2-201ENST00000587099 1412 ntBASIC21.73■■□□□ 1.07
COL4A2P08572 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL4A2P08572 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL4A2P08572 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL4A2P08572 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.73■■□□□ 1.07
COL4A2P08572 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL4A2P08572 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.73■■□□□ 1.07
COL4A2P08572 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.73■■□□□ 1.07
COL4A2P08572 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL4A2P08572 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL4A2P08572 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL4A2P08572 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL4A2P08572 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.72■■□□□ 1.07
COL4A2P08572 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL4A2P08572 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL4A2P08572 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.72■■□□□ 1.07
COL4A2P08572 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL4A2P08572 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.72■■□□□ 1.07
COL4A2P08572 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.72■■□□□ 1.07
COL4A2P08572 KRT18P29-201ENST00000397031 1267 ntBASIC21.72■■□□□ 1.07
COL4A2P08572 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.72■■□□□ 1.07
COL4A2P08572 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.72■■□□□ 1.07
COL4A2P08572 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.72■■□□□ 1.07
COL4A2P08572 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.72■■□□□ 1.07
COL4A2P08572 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL4A2P08572 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL4A2P08572 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL4A2P08572 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL4A2P08572 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL4A2P08572 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.71■■□□□ 1.07
COL4A2P08572 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.71■■□□□ 1.07
COL4A2P08572 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL4A2P08572 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms