Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CTSBP07858 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CTSBP07858 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTSBP07858 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTSBP07858 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTSBP07858 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTSBP07858 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CTSBP07858 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CTSBP07858 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CTSBP07858 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.32■□□□□ 0.84
CTSBP07858 AC016769.1-201ENST00000409132 1010 ntBASIC20.32■□□□□ 0.84
CTSBP07858 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.32■□□□□ 0.84
CTSBP07858 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.32■□□□□ 0.84
CTSBP07858 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.32■□□□□ 0.84
CTSBP07858 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CTSBP07858 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CTSBP07858 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.32■□□□□ 0.84
CTSBP07858 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.32■□□□□ 0.84
CTSBP07858 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.32■□□□□ 0.84
CTSBP07858 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CTSBP07858 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CTSBP07858 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTSBP07858 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTSBP07858 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CTSBP07858 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTSBP07858 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CTSBP07858 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CTSBP07858 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
CTSBP07858 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.31■□□□□ 0.84
CTSBP07858 AC011767.1-201ENST00000617410 1153 ntBASIC20.31■□□□□ 0.84
CTSBP07858 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.31■□□□□ 0.84
CTSBP07858 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CTSBP07858 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTSBP07858 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CTSBP07858 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.3■□□□□ 0.84
CTSBP07858 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTSBP07858 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CTSBP07858 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CTSBP07858 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.3■□□□□ 0.84
CTSBP07858 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.3■□□□□ 0.84
CTSBP07858 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CTSBP07858 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTSBP07858 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.29■□□□□ 0.84
CTSBP07858 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTSBP07858 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTSBP07858 AC003102.1-202ENST00000563394 1796 ntBASIC20.29■□□□□ 0.84
CTSBP07858 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
CTSBP07858 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTSBP07858 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTSBP07858 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.29■□□□□ 0.84
CTSBP07858 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTSBP07858 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.29■□□□□ 0.84
CTSBP07858 AP001160.3-201ENST00000601484 763 ntBASIC20.29■□□□□ 0.84
CTSBP07858 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTSBP07858 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTSBP07858 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTSBP07858 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTSBP07858 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTSBP07858 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CTSBP07858 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CTSBP07858 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTSBP07858 AC010542.4-201ENST00000563151 1910 ntBASIC20.28■□□□□ 0.84
CTSBP07858 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CTSBP07858 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTSBP07858 AC080038.1-201ENST00000611274 1154 ntBASIC20.28■□□□□ 0.84
CTSBP07858 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CTSBP07858 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTSBP07858 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTSBP07858 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CTSBP07858 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
CTSBP07858 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.28■□□□□ 0.84
CTSBP07858 FAM99A-202ENST00000538190 1989 ntBASIC20.28■□□□□ 0.84
CTSBP07858 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTSBP07858 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CTSBP07858 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTSBP07858 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTSBP07858 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.27■□□□□ 0.84
CTSBP07858 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.27■□□□□ 0.84
CTSBP07858 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
CTSBP07858 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTSBP07858 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.27■□□□□ 0.84
CTSBP07858 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTSBP07858 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CTSBP07858 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTSBP07858 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.27■□□□□ 0.84
CTSBP07858 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CTSBP07858 EEF1DP3-203ENST00000566025 782 ntBASIC20.27■□□□□ 0.84
CTSBP07858 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.27■□□□□ 0.84
CTSBP07858 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.27■□□□□ 0.84
CTSBP07858 UBE2DNL-204ENST00000602536 740 ntBASIC20.27■□□□□ 0.84
CTSBP07858 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CTSBP07858 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CTSBP07858 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.27■□□□□ 0.83
CTSBP07858 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
CTSBP07858 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTSBP07858 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
CTSBP07858 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTSBP07858 AC242852.2-201ENST00000615738 1807 ntBASIC20.26■□□□□ 0.83
CTSBP07858 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTSBP07858 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms