Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TCRAP04437 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TCRAP04437 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TCRAP04437 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TCRAP04437 LINC01006-201ENST00000333319 2292 ntBASIC16.21■□□□□ 0.19
TCRAP04437 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TCRAP04437 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC16.21■□□□□ 0.19
TCRAP04437 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TCRAP04437 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TCRAP04437 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TCRAP04437 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TCRAP04437 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
TCRAP04437 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC16.21■□□□□ 0.19
TCRAP04437 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TCRAP04437 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC16.21■□□□□ 0.19
TCRAP04437 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC16.21■□□□□ 0.19
TCRAP04437 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TCRAP04437 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC16.21■□□□□ 0.19
TCRAP04437 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.21■□□□□ 0.19
TCRAP04437 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TCRAP04437 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TCRAP04437 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.21■□□□□ 0.19
TCRAP04437 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TCRAP04437 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TCRAP04437 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TCRAP04437 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TCRAP04437 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.2■□□□□ 0.18
TCRAP04437 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TCRAP04437 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TCRAP04437 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.2■□□□□ 0.18
TCRAP04437 USP45-205ENST00000472914 1617 ntTSL 5 BASIC16.2■□□□□ 0.18
TCRAP04437 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TCRAP04437 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TCRAP04437 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.2■□□□□ 0.18
TCRAP04437 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TCRAP04437 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
TCRAP04437 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
TCRAP04437 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.2■□□□□ 0.18
TCRAP04437 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.2■□□□□ 0.18
TCRAP04437 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TCRAP04437 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TCRAP04437 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TCRAP04437 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TCRAP04437 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.2■□□□□ 0.18
TCRAP04437 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TCRAP04437 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TCRAP04437 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.19■□□□□ 0.18
TCRAP04437 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.19■□□□□ 0.18
TCRAP04437 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TCRAP04437 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TCRAP04437 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TCRAP04437 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TCRAP04437 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TCRAP04437 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC16.19■□□□□ 0.18
TCRAP04437 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TCRAP04437 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TCRAP04437 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TCRAP04437 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TCRAP04437 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TCRAP04437 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TCRAP04437 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
TCRAP04437 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TCRAP04437 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TCRAP04437 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TCRAP04437 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC16.18■□□□□ 0.18
TCRAP04437 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC16.18■□□□□ 0.18
TCRAP04437 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC16.18■□□□□ 0.18
TCRAP04437 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC16.18■□□□□ 0.18
TCRAP04437 AC092028.1-203ENST00000608262 953 ntBASIC16.18■□□□□ 0.18
TCRAP04437 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TCRAP04437 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TCRAP04437 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TCRAP04437 FEM1AP1-201ENST00000431297 1995 ntBASIC16.18■□□□□ 0.18
TCRAP04437 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TCRAP04437 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TCRAP04437 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TCRAP04437 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.18■□□□□ 0.18
TCRAP04437 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
TCRAP04437 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.18■□□□□ 0.18
TCRAP04437 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.17■□□□□ 0.18
TCRAP04437 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TCRAP04437 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TCRAP04437 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
TCRAP04437 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TCRAP04437 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TCRAP04437 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TCRAP04437 CD72-202ENST00000378430 585 ntTSL 3 BASIC16.17■□□□□ 0.18
TCRAP04437 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC16.17■□□□□ 0.18
TCRAP04437 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.17■□□□□ 0.18
TCRAP04437 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC16.17■□□□□ 0.18
TCRAP04437 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC16.17■□□□□ 0.18
TCRAP04437 MTDHP2-201ENST00000601468 714 ntBASIC16.17■□□□□ 0.18
TCRAP04437 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TCRAP04437 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TCRAP04437 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TCRAP04437 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TCRAP04437 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC16.17■□□□□ 0.18
TCRAP04437 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TCRAP04437 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCRAP04437 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms