Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.63■□□□□ 0.57
LCATP04180 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
LCATP04180 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LCATP04180 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LCATP04180 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.63■□□□□ 0.57
LCATP04180 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LCATP04180 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
LCATP04180 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LCATP04180 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
LCATP04180 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LCATP04180 AP001330.3-201ENST00000520123 633 ntBASIC18.63■□□□□ 0.57
LCATP04180 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.63■□□□□ 0.57
LCATP04180 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.63■□□□□ 0.57
LCATP04180 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.63■□□□□ 0.57
LCATP04180 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LCATP04180 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.63■□□□□ 0.57
LCATP04180 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.63■□□□□ 0.57
LCATP04180 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LCATP04180 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LCATP04180 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LCATP04180 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
LCATP04180 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.63■□□□□ 0.57
LCATP04180 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.63■□□□□ 0.57
LCATP04180 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LCATP04180 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.62■□□□□ 0.57
LCATP04180 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.62■□□□□ 0.57
LCATP04180 AF213884.3-201ENST00000563833 479 ntBASIC18.62■□□□□ 0.57
LCATP04180 AC133561.4-201ENST00000566112 224 ntBASIC18.62■□□□□ 0.57
LCATP04180 AL139246.5-201ENST00000606645 996 ntBASIC18.62■□□□□ 0.57
LCATP04180 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LCATP04180 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LCATP04180 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
LCATP04180 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LCATP04180 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
LCATP04180 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LCATP04180 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.62■□□□□ 0.57
LCATP04180 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LCATP04180 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
LCATP04180 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
LCATP04180 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.62■□□□□ 0.57
LCATP04180 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
LCATP04180 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LCATP04180 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
LCATP04180 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LCATP04180 TSPY26P-201ENST00000476365 1326 ntBASIC18.61■□□□□ 0.57
LCATP04180 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LCATP04180 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LCATP04180 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LCATP04180 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.61■□□□□ 0.57
LCATP04180 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LCATP04180 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.61■□□□□ 0.57
LCATP04180 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LCATP04180 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
LCATP04180 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.61■□□□□ 0.57
LCATP04180 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LCATP04180 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LCATP04180 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LCATP04180 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LCATP04180 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LCATP04180 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.61■□□□□ 0.57
LCATP04180 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LCATP04180 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LCATP04180 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LCATP04180 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.6■□□□□ 0.57
LCATP04180 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LCATP04180 RASA4CP-201ENST00000424092 1398 ntBASIC18.6■□□□□ 0.57
LCATP04180 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
LCATP04180 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LCATP04180 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
LCATP04180 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LCATP04180 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LCATP04180 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.6■□□□□ 0.57
LCATP04180 AC026471.6-201ENST00000622954 1905 ntBASIC18.6■□□□□ 0.57
LCATP04180 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LCATP04180 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LCATP04180 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LCATP04180 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LCATP04180 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.59■□□□□ 0.57
LCATP04180 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
LCATP04180 MIR939-201ENST00000401314 82 ntBASIC18.59■□□□□ 0.57
LCATP04180 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.59■□□□□ 0.57
LCATP04180 SMUG1P1-201ENST00000590640 811 ntBASIC18.59■□□□□ 0.57
LCATP04180 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LCATP04180 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.59■□□□□ 0.57
LCATP04180 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LCATP04180 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
LCATP04180 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LCATP04180 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LCATP04180 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LCATP04180 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.58■□□□□ 0.57
LCATP04180 AC091305.1-201ENST00000479476 895 ntBASIC18.58■□□□□ 0.56
LCATP04180 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.58■□□□□ 0.56
LCATP04180 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.58■□□□□ 0.56
LCATP04180 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.58■□□□□ 0.56
LCATP04180 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.56
LCATP04180 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LCATP04180 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
LCATP04180 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LCATP04180 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LCATP04180 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms