Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HLA-DRAP01903 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
HLA-DRAP01903 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
HLA-DRAP01903 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
HLA-DRAP01903 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
HLA-DRAP01903 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.99■■□□□ 1.27
HLA-DRAP01903 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
HLA-DRAP01903 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC22.99■■□□□ 1.27
HLA-DRAP01903 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.99■■□□□ 1.27
HLA-DRAP01903 YBX1P1-201ENST00000445822 960 ntBASIC22.99■■□□□ 1.27
HLA-DRAP01903 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.99■■□□□ 1.27
HLA-DRAP01903 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.99■■□□□ 1.27
HLA-DRAP01903 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.99■■□□□ 1.27
HLA-DRAP01903 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC22.99■■□□□ 1.27
HLA-DRAP01903 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
HLA-DRAP01903 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.99■■□□□ 1.27
HLA-DRAP01903 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.99■■□□□ 1.27
HLA-DRAP01903 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
HLA-DRAP01903 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
HLA-DRAP01903 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
HLA-DRAP01903 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
HLA-DRAP01903 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
HLA-DRAP01903 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.98■■□□□ 1.27
HLA-DRAP01903 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
HLA-DRAP01903 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
HLA-DRAP01903 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
HLA-DRAP01903 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
HLA-DRAP01903 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
HLA-DRAP01903 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
HLA-DRAP01903 AC123595.1-201ENST00000440769 1046 ntBASIC22.98■■□□□ 1.27
HLA-DRAP01903 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
HLA-DRAP01903 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
HLA-DRAP01903 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC22.98■■□□□ 1.27
HLA-DRAP01903 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
HLA-DRAP01903 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
HLA-DRAP01903 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
HLA-DRAP01903 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
HLA-DRAP01903 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
HLA-DRAP01903 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
HLA-DRAP01903 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
HLA-DRAP01903 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.97■■□□□ 1.27
HLA-DRAP01903 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.97■■□□□ 1.27
HLA-DRAP01903 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.97■■□□□ 1.27
HLA-DRAP01903 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
HLA-DRAP01903 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
HLA-DRAP01903 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.97■■□□□ 1.27
HLA-DRAP01903 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.97■■□□□ 1.27
HLA-DRAP01903 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
HLA-DRAP01903 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
HLA-DRAP01903 LINC02228-203ENST00000641970 1355 ntBASIC22.97■■□□□ 1.27
HLA-DRAP01903 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
HLA-DRAP01903 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC22.97■■□□□ 1.27
HLA-DRAP01903 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.97■■□□□ 1.27
HLA-DRAP01903 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.96■■□□□ 1.27
HLA-DRAP01903 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
HLA-DRAP01903 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
HLA-DRAP01903 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.96■■□□□ 1.27
HLA-DRAP01903 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
HLA-DRAP01903 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
HLA-DRAP01903 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
HLA-DRAP01903 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.96■■□□□ 1.27
HLA-DRAP01903 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
HLA-DRAP01903 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.96■■□□□ 1.27
HLA-DRAP01903 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.96■■□□□ 1.27
HLA-DRAP01903 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.96■■□□□ 1.27
HLA-DRAP01903 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
HLA-DRAP01903 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
HLA-DRAP01903 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC22.95■■□□□ 1.27
HLA-DRAP01903 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
HLA-DRAP01903 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
HLA-DRAP01903 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
HLA-DRAP01903 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.95■■□□□ 1.26
HLA-DRAP01903 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
HLA-DRAP01903 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.95■■□□□ 1.26
HLA-DRAP01903 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
HLA-DRAP01903 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
HLA-DRAP01903 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.95■■□□□ 1.26
HLA-DRAP01903 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.95■■□□□ 1.26
HLA-DRAP01903 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.95■■□□□ 1.26
HLA-DRAP01903 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.95■■□□□ 1.26
HLA-DRAP01903 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.95■■□□□ 1.26
HLA-DRAP01903 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
HLA-DRAP01903 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.94■■□□□ 1.26
HLA-DRAP01903 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
HLA-DRAP01903 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
HLA-DRAP01903 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC22.94■■□□□ 1.26
HLA-DRAP01903 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
HLA-DRAP01903 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.94■■□□□ 1.26
HLA-DRAP01903 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC22.94■■□□□ 1.26
HLA-DRAP01903 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.94■■□□□ 1.26
HLA-DRAP01903 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.94■■□□□ 1.26
HLA-DRAP01903 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
HLA-DRAP01903 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.94■■□□□ 1.26
HLA-DRAP01903 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
HLA-DRAP01903 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.94■■□□□ 1.26
HLA-DRAP01903 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
HLA-DRAP01903 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.93■■□□□ 1.26
HLA-DRAP01903 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
HLA-DRAP01903 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.93■■□□□ 1.26
HLA-DRAP01903 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms