Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
HLA-AP01891 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-AP01891 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
HLA-AP01891 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
HLA-AP01891 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-AP01891 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
HLA-AP01891 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-AP01891 FP325331.1-202ENST00000623531 1380 ntBASIC17.94■□□□□ 0.46
HLA-AP01891 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.94■□□□□ 0.46
HLA-AP01891 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.94■□□□□ 0.46
HLA-AP01891 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-AP01891 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-AP01891 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.94■□□□□ 0.46
HLA-AP01891 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-AP01891 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-AP01891 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-AP01891 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-AP01891 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-AP01891 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-AP01891 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-AP01891 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
HLA-AP01891 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-AP01891 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
HLA-AP01891 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-AP01891 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-AP01891 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-AP01891 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-AP01891 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.93■□□□□ 0.46
HLA-AP01891 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-AP01891 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.93■□□□□ 0.46
HLA-AP01891 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-AP01891 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.93■□□□□ 0.46
HLA-AP01891 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.93■□□□□ 0.46
HLA-AP01891 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
HLA-AP01891 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-AP01891 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.92■□□□□ 0.46
HLA-AP01891 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-AP01891 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.92■□□□□ 0.46
HLA-AP01891 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.92■□□□□ 0.46
HLA-AP01891 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-AP01891 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.92■□□□□ 0.46
HLA-AP01891 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.92■□□□□ 0.46
HLA-AP01891 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-AP01891 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-AP01891 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-AP01891 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
HLA-AP01891 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-AP01891 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
HLA-AP01891 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-AP01891 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
HLA-AP01891 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-AP01891 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-AP01891 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-AP01891 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
HLA-AP01891 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-AP01891 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-AP01891 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HLA-AP01891 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
HLA-AP01891 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-AP01891 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-AP01891 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-AP01891 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.91■□□□□ 0.46
HLA-AP01891 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-AP01891 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-AP01891 KRT18P24-201ENST00000344739 1156 ntBASIC17.91■□□□□ 0.46
HLA-AP01891 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-AP01891 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-AP01891 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-AP01891 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.91■□□□□ 0.46
HLA-AP01891 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-AP01891 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-AP01891 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-AP01891 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-AP01891 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-AP01891 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-AP01891 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-AP01891 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-AP01891 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.9■□□□□ 0.46
HLA-AP01891 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.9■□□□□ 0.46
HLA-AP01891 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-AP01891 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-AP01891 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-AP01891 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.9■□□□□ 0.46
HLA-AP01891 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HLA-AP01891 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-AP01891 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.9■□□□□ 0.46
HLA-AP01891 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-AP01891 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-AP01891 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.9■□□□□ 0.46
HLA-AP01891 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.9■□□□□ 0.46
HLA-AP01891 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.9■□□□□ 0.46
HLA-AP01891 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC17.9■□□□□ 0.46
HLA-AP01891 AL031848.2-201ENST00000607670 837 ntBASIC17.9■□□□□ 0.46
HLA-AP01891 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-AP01891 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-AP01891 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
HLA-AP01891 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-AP01891 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
HLA-AP01891 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.89■□□□□ 0.46
HLA-AP01891 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms