Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SIX6O95475 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SIX6O95475 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SIX6O95475 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.83■□□□□ 0.45
SIX6O95475 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
SIX6O95475 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC17.83■□□□□ 0.45
SIX6O95475 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SIX6O95475 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.83■□□□□ 0.44
SIX6O95475 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SIX6O95475 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SIX6O95475 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SIX6O95475 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SIX6O95475 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SIX6O95475 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.82■□□□□ 0.44
SIX6O95475 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIX6O95475 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.82■□□□□ 0.44
SIX6O95475 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SIX6O95475 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIX6O95475 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SIX6O95475 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIX6O95475 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIX6O95475 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SIX6O95475 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SIX6O95475 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.82■□□□□ 0.44
SIX6O95475 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.82■□□□□ 0.44
SIX6O95475 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SIX6O95475 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIX6O95475 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
SIX6O95475 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIX6O95475 GAK-223ENST00000628912 497 ntTSL 5 BASIC17.82■□□□□ 0.44
SIX6O95475 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIX6O95475 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.82■□□□□ 0.44
SIX6O95475 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SIX6O95475 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SIX6O95475 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.82■□□□□ 0.44
SIX6O95475 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC17.82■□□□□ 0.44
SIX6O95475 AC026471.6-201ENST00000622954 1905 ntBASIC17.82■□□□□ 0.44
SIX6O95475 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
SIX6O95475 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SIX6O95475 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC17.82■□□□□ 0.44
SIX6O95475 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC17.82■□□□□ 0.44
SIX6O95475 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SIX6O95475 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIX6O95475 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIX6O95475 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SIX6O95475 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC17.81■□□□□ 0.44
SIX6O95475 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIX6O95475 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIX6O95475 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIX6O95475 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIX6O95475 CEP120-209ENST00000515110 606 ntTSL 3 BASIC17.81■□□□□ 0.44
SIX6O95475 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SIX6O95475 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIX6O95475 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SIX6O95475 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SIX6O95475 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIX6O95475 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.81■□□□□ 0.44
SIX6O95475 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIX6O95475 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.8■□□□□ 0.44
SIX6O95475 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIX6O95475 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIX6O95475 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIX6O95475 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.8■□□□□ 0.44
SIX6O95475 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC17.8■□□□□ 0.44
SIX6O95475 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.8■□□□□ 0.44
SIX6O95475 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.8■□□□□ 0.44
SIX6O95475 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIX6O95475 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.8■□□□□ 0.44
SIX6O95475 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIX6O95475 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC17.8■□□□□ 0.44
SIX6O95475 SPCS2P3-201ENST00000500401 656 ntBASIC17.8■□□□□ 0.44
SIX6O95475 CA15P2-201ENST00000611168 834 ntBASIC17.8■□□□□ 0.44
SIX6O95475 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.8■□□□□ 0.44
SIX6O95475 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SIX6O95475 LINC01529-204ENST00000636474 1715 ntBASIC17.8■□□□□ 0.44
SIX6O95475 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.8■□□□□ 0.44
SIX6O95475 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIX6O95475 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.8■□□□□ 0.44
SIX6O95475 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.79■□□□□ 0.44
SIX6O95475 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SIX6O95475 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.79■□□□□ 0.44
SIX6O95475 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SIX6O95475 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SIX6O95475 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SIX6O95475 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SIX6O95475 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SIX6O95475 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SIX6O95475 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.79■□□□□ 0.44
SIX6O95475 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SIX6O95475 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SIX6O95475 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SIX6O95475 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SIX6O95475 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SIX6O95475 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SIX6O95475 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SIX6O95475 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SIX6O95475 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SIX6O95475 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SIX6O95475 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SIX6O95475 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms