Protein–RNA interactions for Protein: O75396

SEC22B, Vesicle-trafficking protein SEC22b, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22BO75396 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.54■□□□□ 0.88
SEC22BO75396 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.54■□□□□ 0.88
SEC22BO75396 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.54■□□□□ 0.88
SEC22BO75396 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SEC22BO75396 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SEC22BO75396 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SEC22BO75396 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.53■□□□□ 0.88
SEC22BO75396 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.53■□□□□ 0.88
SEC22BO75396 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SEC22BO75396 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SEC22BO75396 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.53■□□□□ 0.88
SEC22BO75396 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SEC22BO75396 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SEC22BO75396 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SEC22BO75396 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SEC22BO75396 AP005435.1-201ENST00000529293 1178 ntBASIC20.53■□□□□ 0.88
SEC22BO75396 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.53■□□□□ 0.88
SEC22BO75396 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
SEC22BO75396 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SEC22BO75396 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SEC22BO75396 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.53■□□□□ 0.88
SEC22BO75396 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SEC22BO75396 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SEC22BO75396 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SEC22BO75396 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SEC22BO75396 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SEC22BO75396 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.52■□□□□ 0.88
SEC22BO75396 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SEC22BO75396 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SEC22BO75396 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SEC22BO75396 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.52■□□□□ 0.88
SEC22BO75396 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SEC22BO75396 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SEC22BO75396 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.52■□□□□ 0.88
SEC22BO75396 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SEC22BO75396 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SEC22BO75396 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.52■□□□□ 0.88
SEC22BO75396 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
SEC22BO75396 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.52■□□□□ 0.88
SEC22BO75396 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SEC22BO75396 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SEC22BO75396 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SEC22BO75396 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SEC22BO75396 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SEC22BO75396 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SEC22BO75396 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
SEC22BO75396 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SEC22BO75396 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SEC22BO75396 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.51■□□□□ 0.87
SEC22BO75396 AL034346.1-201ENST00000568244 1277 ntBASIC20.51■□□□□ 0.87
SEC22BO75396 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SEC22BO75396 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SEC22BO75396 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SEC22BO75396 AP004607.7-201ENST00000527152 1677 ntBASIC20.51■□□□□ 0.87
SEC22BO75396 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SEC22BO75396 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.51■□□□□ 0.87
SEC22BO75396 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.51■□□□□ 0.87
SEC22BO75396 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SEC22BO75396 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SEC22BO75396 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SEC22BO75396 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SEC22BO75396 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.5■□□□□ 0.87
SEC22BO75396 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SEC22BO75396 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.5■□□□□ 0.87
SEC22BO75396 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.5■□□□□ 0.87
SEC22BO75396 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SEC22BO75396 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.5■□□□□ 0.87
SEC22BO75396 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.5■□□□□ 0.87
SEC22BO75396 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SEC22BO75396 FEM1AP4-201ENST00000443167 1987 ntBASIC20.5■□□□□ 0.87
SEC22BO75396 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.5■□□□□ 0.87
SEC22BO75396 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SEC22BO75396 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SEC22BO75396 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SEC22BO75396 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.49■□□□□ 0.87
SEC22BO75396 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SEC22BO75396 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.49■□□□□ 0.87
SEC22BO75396 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SEC22BO75396 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.49■□□□□ 0.87
SEC22BO75396 AL136116.3-201ENST00000402907 1138 ntBASIC20.49■□□□□ 0.87
SEC22BO75396 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.49■□□□□ 0.87
SEC22BO75396 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.49■□□□□ 0.87
SEC22BO75396 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.49■□□□□ 0.87
SEC22BO75396 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SEC22BO75396 AF106564.1-201ENST00000607058 2553 ntBASIC20.49■□□□□ 0.87
SEC22BO75396 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SEC22BO75396 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.49■□□□□ 0.87
SEC22BO75396 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SEC22BO75396 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SEC22BO75396 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SEC22BO75396 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEC22BO75396 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.48■□□□□ 0.87
SEC22BO75396 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.48■□□□□ 0.87
SEC22BO75396 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SEC22BO75396 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEC22BO75396 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.48■□□□□ 0.87
SEC22BO75396 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEC22BO75396 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SEC22BO75396 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SEC22BO75396 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms