Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.41■□□□□ 0.86
CPNE3O75131 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.41■□□□□ 0.86
CPNE3O75131 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CPNE3O75131 AC073111.5-205ENST00000641717 521 ntBASIC20.41■□□□□ 0.86
CPNE3O75131 C9orf163-202ENST00000624034 2573 ntBASIC20.41■□□□□ 0.86
CPNE3O75131 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.41■□□□□ 0.86
CPNE3O75131 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.41■□□□□ 0.86
CPNE3O75131 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPNE3O75131 ESRRAP2-201ENST00000418437 1549 ntBASIC20.41■□□□□ 0.86
CPNE3O75131 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CPNE3O75131 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPNE3O75131 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.41■□□□□ 0.86
CPNE3O75131 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPNE3O75131 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPNE3O75131 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPNE3O75131 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.4■□□□□ 0.86
CPNE3O75131 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CPNE3O75131 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.4■□□□□ 0.86
CPNE3O75131 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.4■□□□□ 0.86
CPNE3O75131 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPNE3O75131 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPNE3O75131 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPNE3O75131 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.4■□□□□ 0.86
CPNE3O75131 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CPNE3O75131 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPNE3O75131 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CPNE3O75131 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CPNE3O75131 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CPNE3O75131 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPNE3O75131 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CPNE3O75131 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPNE3O75131 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPNE3O75131 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CPNE3O75131 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.39■□□□□ 0.86
CPNE3O75131 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.39■□□□□ 0.86
CPNE3O75131 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CPNE3O75131 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.39■□□□□ 0.85
CPNE3O75131 OR7E47P-201ENST00000546390 1422 ntBASIC20.39■□□□□ 0.85
CPNE3O75131 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.39■□□□□ 0.85
CPNE3O75131 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPNE3O75131 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CPNE3O75131 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.39■□□□□ 0.85
CPNE3O75131 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.39■□□□□ 0.85
CPNE3O75131 AC104187.1-201ENST00000607510 612 ntBASIC20.39■□□□□ 0.85
CPNE3O75131 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPNE3O75131 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPNE3O75131 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CPNE3O75131 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPNE3O75131 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPNE3O75131 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPNE3O75131 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CPNE3O75131 CDCA4P2-201ENST00000441182 718 ntBASIC20.38■□□□□ 0.85
CPNE3O75131 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CPNE3O75131 AL034346.1-201ENST00000568244 1277 ntBASIC20.38■□□□□ 0.85
CPNE3O75131 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CPNE3O75131 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPNE3O75131 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.38■□□□□ 0.85
CPNE3O75131 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CPNE3O75131 AP004607.7-201ENST00000527152 1677 ntBASIC20.38■□□□□ 0.85
CPNE3O75131 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPNE3O75131 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CPNE3O75131 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.37■□□□□ 0.85
CPNE3O75131 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE3O75131 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE3O75131 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE3O75131 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE3O75131 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE3O75131 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE3O75131 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE3O75131 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.37■□□□□ 0.85
CPNE3O75131 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.37■□□□□ 0.85
CPNE3O75131 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.37■□□□□ 0.85
CPNE3O75131 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.37■□□□□ 0.85
CPNE3O75131 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.37■□□□□ 0.85
CPNE3O75131 RAP2CP1-201ENST00000605103 478 ntBASIC20.37■□□□□ 0.85
CPNE3O75131 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.37■□□□□ 0.85
CPNE3O75131 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE3O75131 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE3O75131 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CPNE3O75131 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE3O75131 AC055733.4-201ENST00000638462 1354 ntBASIC20.36■□□□□ 0.85
CPNE3O75131 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE3O75131 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE3O75131 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.36■□□□□ 0.85
CPNE3O75131 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.36■□□□□ 0.85
CPNE3O75131 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.36■□□□□ 0.85
CPNE3O75131 AC026185.1-201ENST00000445748 174 ntBASIC20.36■□□□□ 0.85
CPNE3O75131 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.36■□□□□ 0.85
CPNE3O75131 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.36■□□□□ 0.85
CPNE3O75131 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.36■□□□□ 0.85
CPNE3O75131 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE3O75131 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.36■□□□□ 0.85
CPNE3O75131 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE3O75131 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE3O75131 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.36■□□□□ 0.85
CPNE3O75131 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE3O75131 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE3O75131 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CPNE3O75131 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPNE3O75131 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms