Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
HCN1O60741 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HCN1O60741 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.88■□□□□ 0.77
HCN1O60741 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HCN1O60741 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
HCN1O60741 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
HCN1O60741 AC004687.1-201ENST00000579003 1625 ntBASIC19.87■□□□□ 0.77
HCN1O60741 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.87■□□□□ 0.77
HCN1O60741 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HCN1O60741 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.87■□□□□ 0.77
HCN1O60741 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HCN1O60741 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
HCN1O60741 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HCN1O60741 AC034268.1-201ENST00000441047 882 ntBASIC19.87■□□□□ 0.77
HCN1O60741 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.87■□□□□ 0.77
HCN1O60741 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HCN1O60741 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
HCN1O60741 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HCN1O60741 AL137060.1-201ENST00000618151 2648 ntBASIC19.87■□□□□ 0.77
HCN1O60741 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
HCN1O60741 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
HCN1O60741 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HCN1O60741 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.86■□□□□ 0.77
HCN1O60741 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HCN1O60741 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
HCN1O60741 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.86■□□□□ 0.77
HCN1O60741 AL162430.1-201ENST00000480705 870 ntBASIC19.86■□□□□ 0.77
HCN1O60741 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HCN1O60741 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HCN1O60741 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.86■□□□□ 0.77
HCN1O60741 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HCN1O60741 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HCN1O60741 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HCN1O60741 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HCN1O60741 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
HCN1O60741 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.85■□□□□ 0.77
HCN1O60741 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HCN1O60741 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
HCN1O60741 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HCN1O60741 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HCN1O60741 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.85■□□□□ 0.77
HCN1O60741 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.85■□□□□ 0.77
HCN1O60741 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HCN1O60741 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HCN1O60741 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HCN1O60741 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.85■□□□□ 0.77
HCN1O60741 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HCN1O60741 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.85■□□□□ 0.77
HCN1O60741 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HCN1O60741 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HCN1O60741 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
HCN1O60741 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
HCN1O60741 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HCN1O60741 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
HCN1O60741 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.84■□□□□ 0.77
HCN1O60741 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HCN1O60741 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.84■□□□□ 0.77
HCN1O60741 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.84■□□□□ 0.77
HCN1O60741 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.84■□□□□ 0.77
HCN1O60741 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.84■□□□□ 0.77
HCN1O60741 AC087239.1-201ENST00000622671 572 ntBASIC19.84■□□□□ 0.77
HCN1O60741 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HCN1O60741 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HCN1O60741 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HCN1O60741 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.84■□□□□ 0.77
HCN1O60741 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.84■□□□□ 0.77
HCN1O60741 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HCN1O60741 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.84■□□□□ 0.77
HCN1O60741 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.84■□□□□ 0.77
HCN1O60741 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.84■□□□□ 0.77
HCN1O60741 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.83■□□□□ 0.77
HCN1O60741 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HCN1O60741 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
HCN1O60741 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
HCN1O60741 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.83■□□□□ 0.77
HCN1O60741 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
HCN1O60741 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.83■□□□□ 0.77
HCN1O60741 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
HCN1O60741 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HCN1O60741 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.83■□□□□ 0.77
HCN1O60741 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.83■□□□□ 0.77
HCN1O60741 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.83■□□□□ 0.77
HCN1O60741 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HCN1O60741 MIR6084-201ENST00000622012 110 ntBASIC19.83■□□□□ 0.77
HCN1O60741 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.83■□□□□ 0.77
HCN1O60741 AC105233.4-201ENST00000642045 216 ntBASIC19.83■□□□□ 0.77
HCN1O60741 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HCN1O60741 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
HCN1O60741 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HCN1O60741 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HCN1O60741 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HCN1O60741 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HCN1O60741 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HCN1O60741 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.82■□□□□ 0.76
HCN1O60741 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HCN1O60741 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HCN1O60741 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
HCN1O60741 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HCN1O60741 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HCN1O60741 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms