Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CXCL13O43927 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CXCL13O43927 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.13■□□□□ 0.65
CXCL13O43927 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.13■□□□□ 0.65
CXCL13O43927 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.13■□□□□ 0.65
CXCL13O43927 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.13■□□□□ 0.65
CXCL13O43927 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.13■□□□□ 0.65
CXCL13O43927 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CXCL13O43927 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.13■□□□□ 0.65
CXCL13O43927 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.13■□□□□ 0.65
CXCL13O43927 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CXCL13O43927 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CXCL13O43927 AC004854.2-201ENST00000608450 1441 ntBASIC19.13■□□□□ 0.65
CXCL13O43927 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
CXCL13O43927 ECEL1P1-201ENST00000373592 1742 ntBASIC19.13■□□□□ 0.65
CXCL13O43927 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.13■□□□□ 0.65
CXCL13O43927 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CXCL13O43927 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CXCL13O43927 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CXCL13O43927 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CXCL13O43927 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CXCL13O43927 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CXCL13O43927 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CXCL13O43927 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CXCL13O43927 AL117328.2-201ENST00000624617 1940 ntBASIC19.12■□□□□ 0.65
CXCL13O43927 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.12■□□□□ 0.65
CXCL13O43927 AP004607.4-201ENST00000530158 1459 ntBASIC19.12■□□□□ 0.65
CXCL13O43927 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CXCL13O43927 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.12■□□□□ 0.65
CXCL13O43927 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.12■□□□□ 0.65
CXCL13O43927 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.12■□□□□ 0.65
CXCL13O43927 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.12■□□□□ 0.65
CXCL13O43927 AC104564.3-201ENST00000582367 638 ntBASIC19.12■□□□□ 0.65
CXCL13O43927 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.12■□□□□ 0.65
CXCL13O43927 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CXCL13O43927 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.11■□□□□ 0.65
CXCL13O43927 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.11■□□□□ 0.65
CXCL13O43927 KRT87P-202ENST00000534226 1464 ntBASIC19.11■□□□□ 0.65
CXCL13O43927 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CXCL13O43927 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CXCL13O43927 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CXCL13O43927 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CXCL13O43927 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
CXCL13O43927 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.11■□□□□ 0.65
CXCL13O43927 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.11■□□□□ 0.65
CXCL13O43927 KRT18P61-201ENST00000585825 1298 ntBASIC19.11■□□□□ 0.65
CXCL13O43927 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.11■□□□□ 0.65
CXCL13O43927 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CXCL13O43927 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.11■□□□□ 0.65
CXCL13O43927 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CXCL13O43927 FAM99A-202ENST00000538190 1989 ntBASIC19.11■□□□□ 0.65
CXCL13O43927 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CXCL13O43927 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CXCL13O43927 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CXCL13O43927 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CXCL13O43927 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CXCL13O43927 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CXCL13O43927 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CXCL13O43927 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CXCL13O43927 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CXCL13O43927 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CXCL13O43927 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CXCL13O43927 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.1■□□□□ 0.65
CXCL13O43927 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CXCL13O43927 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.1■□□□□ 0.65
CXCL13O43927 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
CXCL13O43927 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.1■□□□□ 0.65
CXCL13O43927 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CXCL13O43927 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.1■□□□□ 0.65
CXCL13O43927 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CXCL13O43927 AC026471.6-201ENST00000622954 1905 ntBASIC19.1■□□□□ 0.65
CXCL13O43927 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CXCL13O43927 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.09■□□□□ 0.65
CXCL13O43927 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CXCL13O43927 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CXCL13O43927 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CXCL13O43927 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
CXCL13O43927 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CXCL13O43927 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.09■□□□□ 0.65
CXCL13O43927 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CXCL13O43927 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.09■□□□□ 0.65
CXCL13O43927 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CXCL13O43927 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
CXCL13O43927 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CXCL13O43927 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.09■□□□□ 0.65
CXCL13O43927 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.08■□□□□ 0.65
CXCL13O43927 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CXCL13O43927 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CXCL13O43927 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CXCL13O43927 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CXCL13O43927 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.08■□□□□ 0.64
CXCL13O43927 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.08■□□□□ 0.64
CXCL13O43927 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.08■□□□□ 0.64
CXCL13O43927 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.08■□□□□ 0.64
CXCL13O43927 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
CXCL13O43927 AC092666.2-201ENST00000613287 246 ntBASIC19.08■□□□□ 0.64
CXCL13O43927 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CXCL13O43927 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CXCL13O43927 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
CXCL13O43927 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms