Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.36■□□□□ 0.53
PHF1O43189 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PHF1O43189 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHF1O43189 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PHF1O43189 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PHF1O43189 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHF1O43189 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.35■□□□□ 0.53
PHF1O43189 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHF1O43189 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
PHF1O43189 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PHF1O43189 AC004687.1-201ENST00000579003 1625 ntBASIC18.35■□□□□ 0.53
PHF1O43189 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHF1O43189 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.35■□□□□ 0.53
PHF1O43189 AC123595.1-201ENST00000440769 1046 ntBASIC18.35■□□□□ 0.53
PHF1O43189 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PHF1O43189 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.35■□□□□ 0.53
PHF1O43189 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHF1O43189 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHF1O43189 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHF1O43189 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHF1O43189 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PHF1O43189 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PHF1O43189 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHF1O43189 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PHF1O43189 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHF1O43189 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHF1O43189 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHF1O43189 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHF1O43189 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
PHF1O43189 TSPY26P-201ENST00000476365 1326 ntBASIC18.34■□□□□ 0.53
PHF1O43189 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHF1O43189 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PHF1O43189 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.34■□□□□ 0.53
PHF1O43189 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PHF1O43189 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHF1O43189 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PHF1O43189 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHF1O43189 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.34■□□□□ 0.53
PHF1O43189 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.34■□□□□ 0.53
PHF1O43189 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PHF1O43189 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.34■□□□□ 0.53
PHF1O43189 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHF1O43189 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
PHF1O43189 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PHF1O43189 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PHF1O43189 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
PHF1O43189 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
PHF1O43189 ABHD17AP1-201ENST00000358206 933 ntBASIC18.33■□□□□ 0.52
PHF1O43189 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.33■□□□□ 0.52
PHF1O43189 AC027612.3-201ENST00000413684 1047 ntBASIC18.33■□□□□ 0.52
PHF1O43189 OR2I1P-207ENST00000453522 948 ntBASIC18.33■□□□□ 0.52
PHF1O43189 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.33■□□□□ 0.52
PHF1O43189 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
PHF1O43189 NTF6G-201ENST00000591094 616 ntBASIC18.33■□□□□ 0.52
PHF1O43189 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PHF1O43189 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PHF1O43189 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PHF1O43189 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PHF1O43189 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.33■□□□□ 0.52
PHF1O43189 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
PHF1O43189 FBXW4P1-201ENST00000426721 2239 ntBASIC18.33■□□□□ 0.52
PHF1O43189 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PHF1O43189 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PHF1O43189 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHF1O43189 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHF1O43189 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHF1O43189 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHF1O43189 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHF1O43189 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHF1O43189 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.32■□□□□ 0.52
PHF1O43189 AL358852.1-201ENST00000623174 1268 ntBASIC18.32■□□□□ 0.52
PHF1O43189 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHF1O43189 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PHF1O43189 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PHF1O43189 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHF1O43189 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.32■□□□□ 0.52
PHF1O43189 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHF1O43189 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PHF1O43189 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PHF1O43189 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.31■□□□□ 0.52
PHF1O43189 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PHF1O43189 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.31■□□□□ 0.52
PHF1O43189 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PHF1O43189 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PHF1O43189 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PHF1O43189 AL024507.2-201ENST00000606070 2574 ntBASIC18.31■□□□□ 0.52
PHF1O43189 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.31■□□□□ 0.52
PHF1O43189 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PHF1O43189 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.31■□□□□ 0.52
PHF1O43189 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.31■□□□□ 0.52
PHF1O43189 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PHF1O43189 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PHF1O43189 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PHF1O43189 AC080038.3-201ENST00000623346 1952 ntBASIC18.31■□□□□ 0.52
PHF1O43189 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PHF1O43189 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PHF1O43189 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PHF1O43189 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PHF1O43189 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PHF1O43189 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms