Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PFDN6O15212 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
PFDN6O15212 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.33■■□□□ 1.01
PFDN6O15212 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
PFDN6O15212 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PFDN6O15212 AC110285.6-201ENST00000617652 491 ntBASIC21.33■■□□□ 1.01
PFDN6O15212 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PFDN6O15212 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PFDN6O15212 RASA4CP-201ENST00000424092 1398 ntBASIC21.33■■□□□ 1
PFDN6O15212 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.33■■□□□ 1
PFDN6O15212 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
PFDN6O15212 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PFDN6O15212 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PFDN6O15212 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.32■■□□□ 1
PFDN6O15212 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.32■■□□□ 1
PFDN6O15212 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
PFDN6O15212 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PFDN6O15212 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.32■■□□□ 1
PFDN6O15212 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PFDN6O15212 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.32■■□□□ 1
PFDN6O15212 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.32■■□□□ 1
PFDN6O15212 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.32■■□□□ 1
PFDN6O15212 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.32■■□□□ 1
PFDN6O15212 AL139246.5-201ENST00000606645 996 ntBASIC21.32■■□□□ 1
PFDN6O15212 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PFDN6O15212 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PFDN6O15212 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PFDN6O15212 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
PFDN6O15212 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.32■■□□□ 1
PFDN6O15212 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PFDN6O15212 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.32■■□□□ 1
PFDN6O15212 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
PFDN6O15212 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
PFDN6O15212 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PFDN6O15212 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
PFDN6O15212 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.31■■□□□ 1
PFDN6O15212 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
PFDN6O15212 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
PFDN6O15212 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
PFDN6O15212 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.31■■□□□ 1
PFDN6O15212 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.31■■□□□ 1
PFDN6O15212 AC091305.1-201ENST00000479476 895 ntBASIC21.31■■□□□ 1
PFDN6O15212 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.31■■□□□ 1
PFDN6O15212 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.31■■□□□ 1
PFDN6O15212 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PFDN6O15212 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.31■■□□□ 1
PFDN6O15212 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.31■■□□□ 1
PFDN6O15212 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.31■■□□□ 1
PFDN6O15212 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
PFDN6O15212 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PFDN6O15212 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
PFDN6O15212 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.3■■□□□ 1
PFDN6O15212 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.3■■□□□ 1
PFDN6O15212 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.3■■□□□ 1
PFDN6O15212 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
PFDN6O15212 AC010542.4-201ENST00000563151 1910 ntBASIC21.3■■□□□ 1
PFDN6O15212 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.3■■□□□ 1
PFDN6O15212 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PFDN6O15212 AP001330.3-201ENST00000520123 633 ntBASIC21.3■■□□□ 1
PFDN6O15212 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.3■■□□□ 1
PFDN6O15212 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.3■■□□□ 1
PFDN6O15212 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.3■■□□□ 1
PFDN6O15212 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.3■■□□□ 1
PFDN6O15212 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PFDN6O15212 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PFDN6O15212 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PFDN6O15212 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
PFDN6O15212 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PFDN6O15212 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.29■■□□□ 1
PFDN6O15212 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PFDN6O15212 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PFDN6O15212 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.29■■□□□ 1
PFDN6O15212 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PFDN6O15212 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PFDN6O15212 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.29■■□□□ 1
PFDN6O15212 TSPY26P-201ENST00000476365 1326 ntBASIC21.29■■□□□ 1
PFDN6O15212 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PFDN6O15212 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.28■■□□□ 1
PFDN6O15212 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
PFDN6O15212 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PFDN6O15212 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PFDN6O15212 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PFDN6O15212 MIR939-201ENST00000401314 82 ntBASIC21.28■■□□□ 1
PFDN6O15212 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.28■■□□□ 1
PFDN6O15212 SMUG1P1-201ENST00000590640 811 ntBASIC21.28■■□□□ 1
PFDN6O15212 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PFDN6O15212 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PFDN6O15212 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PFDN6O15212 AC244015.2-201ENST00000616358 1861 ntBASIC21.28■■□□□ 1
PFDN6O15212 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PFDN6O15212 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.28■■□□□ 1
PFDN6O15212 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.27■■□□□ 1
PFDN6O15212 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.27■■□□□ 1
PFDN6O15212 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.27■■□□□ 1
PFDN6O15212 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
PFDN6O15212 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PFDN6O15212 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
PFDN6O15212 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PFDN6O15212 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PFDN6O15212 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms