Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.79■□□□□ 0.92
TAF4O00268 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TAF4O00268 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TAF4O00268 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TAF4O00268 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.78■□□□□ 0.92
TAF4O00268 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TAF4O00268 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
TAF4O00268 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
TAF4O00268 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
TAF4O00268 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TAF4O00268 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.78■□□□□ 0.92
TAF4O00268 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.78■□□□□ 0.92
TAF4O00268 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TAF4O00268 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.78■□□□□ 0.92
TAF4O00268 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.78■□□□□ 0.92
TAF4O00268 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TAF4O00268 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TAF4O00268 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TAF4O00268 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TAF4O00268 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.78■□□□□ 0.92
TAF4O00268 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.77■□□□□ 0.92
TAF4O00268 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TAF4O00268 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.77■□□□□ 0.92
TAF4O00268 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TAF4O00268 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
TAF4O00268 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.77■□□□□ 0.92
TAF4O00268 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
TAF4O00268 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TAF4O00268 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TAF4O00268 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TAF4O00268 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TAF4O00268 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TAF4O00268 GCSHP5-201ENST00000443090 522 ntBASIC20.77■□□□□ 0.92
TAF4O00268 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TAF4O00268 AF201337.1-201ENST00000520239 748 ntBASIC20.77■□□□□ 0.92
TAF4O00268 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.77■□□□□ 0.92
TAF4O00268 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.77■□□□□ 0.92
TAF4O00268 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.91
TAF4O00268 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TAF4O00268 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.76■□□□□ 0.91
TAF4O00268 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TAF4O00268 SLC6A10P-202ENST00000431994 2058 ntBASIC20.76■□□□□ 0.91
TAF4O00268 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TAF4O00268 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.76■□□□□ 0.91
TAF4O00268 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.76■□□□□ 0.91
TAF4O00268 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
TAF4O00268 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TAF4O00268 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TAF4O00268 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TAF4O00268 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TAF4O00268 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TAF4O00268 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TAF4O00268 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.76■□□□□ 0.91
TAF4O00268 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.75■□□□□ 0.91
TAF4O00268 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.75■□□□□ 0.91
TAF4O00268 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.75■□□□□ 0.91
TAF4O00268 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TAF4O00268 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TAF4O00268 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TAF4O00268 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TAF4O00268 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TAF4O00268 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TAF4O00268 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.75■□□□□ 0.91
TAF4O00268 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.75■□□□□ 0.91
TAF4O00268 SLC7A5P1-201ENST00000568957 537 ntBASIC20.75■□□□□ 0.91
TAF4O00268 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
TAF4O00268 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TAF4O00268 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TAF4O00268 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.75■□□□□ 0.91
TAF4O00268 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.75■□□□□ 0.91
TAF4O00268 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.75■□□□□ 0.91
TAF4O00268 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TAF4O00268 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TAF4O00268 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TAF4O00268 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.75■□□□□ 0.91
TAF4O00268 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TAF4O00268 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TAF4O00268 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.74■□□□□ 0.91
TAF4O00268 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TAF4O00268 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TAF4O00268 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TAF4O00268 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.74■□□□□ 0.91
TAF4O00268 RPS2P4-201ENST00000476944 856 ntBASIC20.74■□□□□ 0.91
TAF4O00268 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.74■□□□□ 0.91
TAF4O00268 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TAF4O00268 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TAF4O00268 AC105036.2-201ENST00000569468 176 ntBASIC20.74■□□□□ 0.91
TAF4O00268 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.74■□□□□ 0.91
TAF4O00268 MIR6089-201ENST00000616698 64 ntBASIC20.74■□□□□ 0.91
TAF4O00268 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.74■□□□□ 0.91
TAF4O00268 C1orf229-201ENST00000623686 2258 ntBASIC20.74■□□□□ 0.91
TAF4O00268 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TAF4O00268 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TAF4O00268 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.73■□□□□ 0.91
TAF4O00268 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.73■□□□□ 0.91
TAF4O00268 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TAF4O00268 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TAF4O00268 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TAF4O00268 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TAF4O00268 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms