Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.02■□□□□ 0.63
TVP23AA6NH52 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TVP23AA6NH52 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.01■□□□□ 0.63
TVP23AA6NH52 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TVP23AA6NH52 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TVP23AA6NH52 OXCT2P1-201ENST00000447263 1535 ntBASIC19.01■□□□□ 0.63
TVP23AA6NH52 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.01■□□□□ 0.63
TVP23AA6NH52 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TVP23AA6NH52 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TVP23AA6NH52 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TVP23AA6NH52 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
TVP23AA6NH52 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.01■□□□□ 0.63
TVP23AA6NH52 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.01■□□□□ 0.63
TVP23AA6NH52 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TVP23AA6NH52 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TVP23AA6NH52 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
TVP23AA6NH52 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.01■□□□□ 0.63
TVP23AA6NH52 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.01■□□□□ 0.63
TVP23AA6NH52 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TVP23AA6NH52 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TVP23AA6NH52 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19■□□□□ 0.63
TVP23AA6NH52 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TVP23AA6NH52 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19■□□□□ 0.63
TVP23AA6NH52 SLC47A1P1-202ENST00000449666 945 ntBASIC19■□□□□ 0.63
TVP23AA6NH52 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19■□□□□ 0.63
TVP23AA6NH52 DUX4L19-201ENST00000557448 1267 ntBASIC19■□□□□ 0.63
TVP23AA6NH52 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19■□□□□ 0.63
TVP23AA6NH52 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19■□□□□ 0.63
TVP23AA6NH52 AL138724.1-201ENST00000606771 1088 ntBASIC19■□□□□ 0.63
TVP23AA6NH52 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TVP23AA6NH52 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TVP23AA6NH52 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TVP23AA6NH52 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TVP23AA6NH52 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19■□□□□ 0.63
TVP23AA6NH52 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TVP23AA6NH52 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TVP23AA6NH52 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TVP23AA6NH52 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TVP23AA6NH52 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19■□□□□ 0.63
TVP23AA6NH52 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TVP23AA6NH52 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TVP23AA6NH52 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
TVP23AA6NH52 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.99■□□□□ 0.63
TVP23AA6NH52 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.99■□□□□ 0.63
TVP23AA6NH52 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TVP23AA6NH52 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.99■□□□□ 0.63
TVP23AA6NH52 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
TVP23AA6NH52 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TVP23AA6NH52 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TVP23AA6NH52 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TVP23AA6NH52 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
TVP23AA6NH52 AC104564.3-201ENST00000582367 638 ntBASIC18.99■□□□□ 0.63
TVP23AA6NH52 AC136469.2-201ENST00000623944 1028 ntBASIC18.99■□□□□ 0.63
TVP23AA6NH52 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.99■□□□□ 0.63
TVP23AA6NH52 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TVP23AA6NH52 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
TVP23AA6NH52 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.99■□□□□ 0.63
TVP23AA6NH52 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TVP23AA6NH52 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TVP23AA6NH52 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TVP23AA6NH52 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TVP23AA6NH52 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.98■□□□□ 0.63
TVP23AA6NH52 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TVP23AA6NH52 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TVP23AA6NH52 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TVP23AA6NH52 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
TVP23AA6NH52 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TVP23AA6NH52 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TVP23AA6NH52 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.98■□□□□ 0.63
TVP23AA6NH52 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.98■□□□□ 0.63
TVP23AA6NH52 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TVP23AA6NH52 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.98■□□□□ 0.63
TVP23AA6NH52 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.98■□□□□ 0.63
TVP23AA6NH52 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.98■□□□□ 0.63
TVP23AA6NH52 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TVP23AA6NH52 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TVP23AA6NH52 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TVP23AA6NH52 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TVP23AA6NH52 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
TVP23AA6NH52 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TVP23AA6NH52 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TVP23AA6NH52 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.98■□□□□ 0.63
TVP23AA6NH52 FEM1AP4-201ENST00000443167 1987 ntBASIC18.97■□□□□ 0.63
TVP23AA6NH52 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.97■□□□□ 0.63
TVP23AA6NH52 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TVP23AA6NH52 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TVP23AA6NH52 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.97■□□□□ 0.63
TVP23AA6NH52 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TVP23AA6NH52 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TVP23AA6NH52 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TVP23AA6NH52 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
TVP23AA6NH52 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.97■□□□□ 0.63
TVP23AA6NH52 AC011298.3-201ENST00000615796 283 ntBASIC18.97■□□□□ 0.63
TVP23AA6NH52 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TVP23AA6NH52 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TVP23AA6NH52 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.97■□□□□ 0.63
TVP23AA6NH52 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.97■□□□□ 0.63
TVP23AA6NH52 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.97■□□□□ 0.63
TVP23AA6NH52 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.97■□□□□ 0.63
TVP23AA6NH52 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms