Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00959A0A1B0GUT2 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LINC00959A0A1B0GUT2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
LINC00959A0A1B0GUT2 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00959A0A1B0GUT2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC14.53□□□□□ -0.08
LINC00959A0A1B0GUT2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC00959A0A1B0GUT2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00959A0A1B0GUT2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC14.52□□□□□ -0.08
LINC00959A0A1B0GUT2 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00959A0A1B0GUT2 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00959A0A1B0GUT2 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LINC00959A0A1B0GUT2 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.08
LINC00959A0A1B0GUT2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC14.52□□□□□ -0.08
LINC00959A0A1B0GUT2 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00959A0A1B0GUT2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
LINC00959A0A1B0GUT2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
LINC00959A0A1B0GUT2 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00959A0A1B0GUT2 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00959A0A1B0GUT2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC14.52□□□□□ -0.09
LINC00959A0A1B0GUT2 AF106564.1-201ENST00000607058 2553 ntBASIC14.52□□□□□ -0.09
LINC00959A0A1B0GUT2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00959A0A1B0GUT2 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC00959A0A1B0GUT2 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC14.52□□□□□ -0.09
LINC00959A0A1B0GUT2 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
LINC00959A0A1B0GUT2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC00959A0A1B0GUT2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00959A0A1B0GUT2 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC14.51□□□□□ -0.09
LINC00959A0A1B0GUT2 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00959A0A1B0GUT2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC00959A0A1B0GUT2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
LINC00959A0A1B0GUT2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
LINC00959A0A1B0GUT2 HES6-206ENST00000409574 738 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC00959A0A1B0GUT2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC00959A0A1B0GUT2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC14.51□□□□□ -0.09
LINC00959A0A1B0GUT2 AL034346.1-201ENST00000568244 1277 ntBASIC14.51□□□□□ -0.09
LINC00959A0A1B0GUT2 AC010525.1-201ENST00000585559 441 ntBASIC14.51□□□□□ -0.09
LINC00959A0A1B0GUT2 TRIR-205ENST00000592273 783 ntTSL 3 BASIC14.51□□□□□ -0.09
LINC00959A0A1B0GUT2 AL512631.2-201ENST00000604634 923 ntBASIC14.51□□□□□ -0.09
LINC00959A0A1B0GUT2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC00959A0A1B0GUT2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00959A0A1B0GUT2 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00959A0A1B0GUT2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00959A0A1B0GUT2 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC14.5□□□□□ -0.09
LINC00959A0A1B0GUT2 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00959A0A1B0GUT2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC14.5□□□□□ -0.09
LINC00959A0A1B0GUT2 PTCHD3P2-201ENST00000424937 1205 ntBASIC14.5□□□□□ -0.09
LINC00959A0A1B0GUT2 DUX4L19-201ENST00000557448 1267 ntBASIC14.5□□□□□ -0.09
LINC00959A0A1B0GUT2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00959A0A1B0GUT2 SRR-208ENST00000576848 588 ntTSL 4 BASIC14.5□□□□□ -0.09
LINC00959A0A1B0GUT2 AL138724.1-201ENST00000606771 1088 ntBASIC14.5□□□□□ -0.09
LINC00959A0A1B0GUT2 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00959A0A1B0GUT2 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00959A0A1B0GUT2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00959A0A1B0GUT2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
LINC00959A0A1B0GUT2 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00959A0A1B0GUT2 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00959A0A1B0GUT2 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00959A0A1B0GUT2 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00959A0A1B0GUT2 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00959A0A1B0GUT2 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00959A0A1B0GUT2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00959A0A1B0GUT2 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC14.49□□□□□ -0.09
LINC00959A0A1B0GUT2 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00959A0A1B0GUT2 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC14.49□□□□□ -0.09
LINC00959A0A1B0GUT2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00959A0A1B0GUT2 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00959A0A1B0GUT2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC14.49□□□□□ -0.09
LINC00959A0A1B0GUT2 SYT6-210ENST00000641643 1587 ntBASIC14.49□□□□□ -0.09
LINC00959A0A1B0GUT2 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00959A0A1B0GUT2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00959A0A1B0GUT2 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00959A0A1B0GUT2 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC14.49□□□□□ -0.09
LINC00959A0A1B0GUT2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
LINC00959A0A1B0GUT2 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00959A0A1B0GUT2 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
LINC00959A0A1B0GUT2 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
LINC00959A0A1B0GUT2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00959A0A1B0GUT2 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00959A0A1B0GUT2 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00959A0A1B0GUT2 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
LINC00959A0A1B0GUT2 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00959A0A1B0GUT2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC14.49□□□□□ -0.09
LINC00959A0A1B0GUT2 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00959A0A1B0GUT2 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC14.49□□□□□ -0.09
LINC00959A0A1B0GUT2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00959A0A1B0GUT2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00959A0A1B0GUT2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00959A0A1B0GUT2 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00959A0A1B0GUT2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00959A0A1B0GUT2 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00959A0A1B0GUT2 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00959A0A1B0GUT2 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00959A0A1B0GUT2 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00959A0A1B0GUT2 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
LINC00959A0A1B0GUT2 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00959A0A1B0GUT2 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00959A0A1B0GUT2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
LINC00959A0A1B0GUT2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00959A0A1B0GUT2 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC14.48□□□□□ -0.09
LINC00959A0A1B0GUT2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms