Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV11-1A0A0K0K1C0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV11-1A0A0K0K1C0 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV11-1A0A0K0K1C0 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV11-1A0A0K0K1C0 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV11-1A0A0K0K1C0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.78■□□□□ 0.76
TRBV11-1A0A0K0K1C0 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
TRBV11-1A0A0K0K1C0 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.78■□□□□ 0.76
TRBV11-1A0A0K0K1C0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
TRBV11-1A0A0K0K1C0 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV11-1A0A0K0K1C0 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV11-1A0A0K0K1C0 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
TRBV11-1A0A0K0K1C0 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.78■□□□□ 0.76
TRBV11-1A0A0K0K1C0 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV11-1A0A0K0K1C0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
TRBV11-1A0A0K0K1C0 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.78■□□□□ 0.76
TRBV11-1A0A0K0K1C0 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV11-1A0A0K0K1C0 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV11-1A0A0K0K1C0 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV11-1A0A0K0K1C0 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.78■□□□□ 0.76
TRBV11-1A0A0K0K1C0 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV11-1A0A0K0K1C0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.78■□□□□ 0.76
TRBV11-1A0A0K0K1C0 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRBV11-1A0A0K0K1C0 GUSBP5-202ENST00000510805 1989 ntBASIC19.77■□□□□ 0.76
TRBV11-1A0A0K0K1C0 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRBV11-1A0A0K0K1C0 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRBV11-1A0A0K0K1C0 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
TRBV11-1A0A0K0K1C0 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.77■□□□□ 0.76
TRBV11-1A0A0K0K1C0 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRBV11-1A0A0K0K1C0 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.77■□□□□ 0.76
TRBV11-1A0A0K0K1C0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.77■□□□□ 0.76
TRBV11-1A0A0K0K1C0 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRBV11-1A0A0K0K1C0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRBV11-1A0A0K0K1C0 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.77■□□□□ 0.75
TRBV11-1A0A0K0K1C0 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TRBV11-1A0A0K0K1C0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.76■□□□□ 0.75
TRBV11-1A0A0K0K1C0 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV11-1A0A0K0K1C0 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV11-1A0A0K0K1C0 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV11-1A0A0K0K1C0 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV11-1A0A0K0K1C0 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.76■□□□□ 0.75
TRBV11-1A0A0K0K1C0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
TRBV11-1A0A0K0K1C0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV11-1A0A0K0K1C0 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.76■□□□□ 0.75
TRBV11-1A0A0K0K1C0 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV11-1A0A0K0K1C0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.76■□□□□ 0.75
TRBV11-1A0A0K0K1C0 AC004911.1-201ENST00000416316 871 ntBASIC19.76■□□□□ 0.75
TRBV11-1A0A0K0K1C0 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.76■□□□□ 0.75
TRBV11-1A0A0K0K1C0 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.76■□□□□ 0.75
TRBV11-1A0A0K0K1C0 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
TRBV11-1A0A0K0K1C0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.76■□□□□ 0.75
TRBV11-1A0A0K0K1C0 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV11-1A0A0K0K1C0 AC242852.2-201ENST00000615738 1807 ntBASIC19.76■□□□□ 0.75
TRBV11-1A0A0K0K1C0 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
TRBV11-1A0A0K0K1C0 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV11-1A0A0K0K1C0 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
TRBV11-1A0A0K0K1C0 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV11-1A0A0K0K1C0 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV11-1A0A0K0K1C0 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV11-1A0A0K0K1C0 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV11-1A0A0K0K1C0 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
TRBV11-1A0A0K0K1C0 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV11-1A0A0K0K1C0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV11-1A0A0K0K1C0 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV11-1A0A0K0K1C0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TRBV11-1A0A0K0K1C0 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV11-1A0A0K0K1C0 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV11-1A0A0K0K1C0 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV11-1A0A0K0K1C0 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.74■□□□□ 0.75
TRBV11-1A0A0K0K1C0 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV11-1A0A0K0K1C0 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV11-1A0A0K0K1C0 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TRBV11-1A0A0K0K1C0 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.74■□□□□ 0.75
TRBV11-1A0A0K0K1C0 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.74■□□□□ 0.75
TRBV11-1A0A0K0K1C0 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.74■□□□□ 0.75
TRBV11-1A0A0K0K1C0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV11-1A0A0K0K1C0 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV11-1A0A0K0K1C0 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV11-1A0A0K0K1C0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV11-1A0A0K0K1C0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV11-1A0A0K0K1C0 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV11-1A0A0K0K1C0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV11-1A0A0K0K1C0 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV11-1A0A0K0K1C0 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV11-1A0A0K0K1C0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV11-1A0A0K0K1C0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.73■□□□□ 0.75
TRBV11-1A0A0K0K1C0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV11-1A0A0K0K1C0 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.73■□□□□ 0.75
TRBV11-1A0A0K0K1C0 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV11-1A0A0K0K1C0 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV11-1A0A0K0K1C0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.73■□□□□ 0.75
TRBV11-1A0A0K0K1C0 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.73■□□□□ 0.75
TRBV11-1A0A0K0K1C0 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV11-1A0A0K0K1C0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.73■□□□□ 0.75
TRBV11-1A0A0K0K1C0 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV11-1A0A0K0K1C0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV11-1A0A0K0K1C0 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV11-1A0A0K0K1C0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
TRBV11-1A0A0K0K1C0 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV11-1A0A0K0K1C0 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms