Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV4-1A0A0J9YWV2 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV4-1A0A0J9YWV2 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV4-1A0A0J9YWV2 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.56■□□□□ 0.72
TRBV4-1A0A0J9YWV2 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
TRBV4-1A0A0J9YWV2 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV4-1A0A0J9YWV2 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV4-1A0A0J9YWV2 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV4-1A0A0J9YWV2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
TRBV4-1A0A0J9YWV2 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
TRBV4-1A0A0J9YWV2 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV4-1A0A0J9YWV2 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
TRBV4-1A0A0J9YWV2 AC010141.3-201ENST00000456659 717 ntBASIC19.55■□□□□ 0.72
TRBV4-1A0A0J9YWV2 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.55■□□□□ 0.72
TRBV4-1A0A0J9YWV2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.55■□□□□ 0.72
TRBV4-1A0A0J9YWV2 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV4-1A0A0J9YWV2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV4-1A0A0J9YWV2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.54■□□□□ 0.72
TRBV4-1A0A0J9YWV2 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV4-1A0A0J9YWV2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV4-1A0A0J9YWV2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV4-1A0A0J9YWV2 MIR3621-201ENST00000580529 85 ntBASIC19.54■□□□□ 0.72
TRBV4-1A0A0J9YWV2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.54■□□□□ 0.72
TRBV4-1A0A0J9YWV2 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV4-1A0A0J9YWV2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TRBV4-1A0A0J9YWV2 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TRBV4-1A0A0J9YWV2 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV4-1A0A0J9YWV2 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV4-1A0A0J9YWV2 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV4-1A0A0J9YWV2 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV4-1A0A0J9YWV2 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TRBV4-1A0A0J9YWV2 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TRBV4-1A0A0J9YWV2 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV4-1A0A0J9YWV2 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.53■□□□□ 0.72
TRBV4-1A0A0J9YWV2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV4-1A0A0J9YWV2 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV4-1A0A0J9YWV2 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV4-1A0A0J9YWV2 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
TRBV4-1A0A0J9YWV2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV4-1A0A0J9YWV2 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV4-1A0A0J9YWV2 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.53■□□□□ 0.72
TRBV4-1A0A0J9YWV2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
TRBV4-1A0A0J9YWV2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.53■□□□□ 0.72
TRBV4-1A0A0J9YWV2 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV4-1A0A0J9YWV2 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV4-1A0A0J9YWV2 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV4-1A0A0J9YWV2 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV4-1A0A0J9YWV2 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
TRBV4-1A0A0J9YWV2 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
TRBV4-1A0A0J9YWV2 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.53■□□□□ 0.72
TRBV4-1A0A0J9YWV2 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.53■□□□□ 0.72
TRBV4-1A0A0J9YWV2 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.53■□□□□ 0.72
TRBV4-1A0A0J9YWV2 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV4-1A0A0J9YWV2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV4-1A0A0J9YWV2 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV4-1A0A0J9YWV2 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.52■□□□□ 0.72
TRBV4-1A0A0J9YWV2 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.52■□□□□ 0.72
TRBV4-1A0A0J9YWV2 OXCT2P1-201ENST00000447263 1535 ntBASIC19.52■□□□□ 0.72
TRBV4-1A0A0J9YWV2 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV4-1A0A0J9YWV2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
TRBV4-1A0A0J9YWV2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV4-1A0A0J9YWV2 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.52■□□□□ 0.72
TRBV4-1A0A0J9YWV2 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.52■□□□□ 0.72
TRBV4-1A0A0J9YWV2 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV4-1A0A0J9YWV2 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
TRBV4-1A0A0J9YWV2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
TRBV4-1A0A0J9YWV2 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRBV4-1A0A0J9YWV2 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRBV4-1A0A0J9YWV2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRBV4-1A0A0J9YWV2 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV4-1A0A0J9YWV2 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV4-1A0A0J9YWV2 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.51■□□□□ 0.71
TRBV4-1A0A0J9YWV2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.51■□□□□ 0.71
TRBV4-1A0A0J9YWV2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.51■□□□□ 0.71
TRBV4-1A0A0J9YWV2 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.51■□□□□ 0.71
TRBV4-1A0A0J9YWV2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.51■□□□□ 0.71
TRBV4-1A0A0J9YWV2 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.51■□□□□ 0.71
TRBV4-1A0A0J9YWV2 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV4-1A0A0J9YWV2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TRBV4-1A0A0J9YWV2 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV4-1A0A0J9YWV2 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV4-1A0A0J9YWV2 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV4-1A0A0J9YWV2 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV4-1A0A0J9YWV2 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
TRBV4-1A0A0J9YWV2 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV4-1A0A0J9YWV2 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.51■□□□□ 0.71
TRBV4-1A0A0J9YWV2 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
TRBV4-1A0A0J9YWV2 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.51■□□□□ 0.71
TRBV4-1A0A0J9YWV2 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV4-1A0A0J9YWV2 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV4-1A0A0J9YWV2 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV4-1A0A0J9YWV2 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV4-1A0A0J9YWV2 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV4-1A0A0J9YWV2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV4-1A0A0J9YWV2 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV4-1A0A0J9YWV2 AC003102.1-202ENST00000563394 1796 ntBASIC19.5■□□□□ 0.71
TRBV4-1A0A0J9YWV2 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.5■□□□□ 0.71
TRBV4-1A0A0J9YWV2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TRBV4-1A0A0J9YWV2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV4-1A0A0J9YWV2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms