Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-3A0A0A6YYJ7 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV8-3A0A0A6YYJ7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV8-3A0A0A6YYJ7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC15.05■□□□□ 0
TRAV8-3A0A0A6YYJ7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ 0
TRAV8-3A0A0A6YYJ7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV8-3A0A0A6YYJ7 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV8-3A0A0A6YYJ7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV8-3A0A0A6YYJ7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRAV8-3A0A0A6YYJ7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC15.05■□□□□ -0
TRAV8-3A0A0A6YYJ7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
TRAV8-3A0A0A6YYJ7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC15.05■□□□□ -0
TRAV8-3A0A0A6YYJ7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV8-3A0A0A6YYJ7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC15.05■□□□□ -0
TRAV8-3A0A0A6YYJ7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC15.05■□□□□ -0
TRAV8-3A0A0A6YYJ7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC15.05■□□□□ -0
TRAV8-3A0A0A6YYJ7 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC15.05■□□□□ -0
TRAV8-3A0A0A6YYJ7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV8-3A0A0A6YYJ7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV8-3A0A0A6YYJ7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV8-3A0A0A6YYJ7 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV8-3A0A0A6YYJ7 RNF165-205ENST00000588679 2904 ntBASIC15.05■□□□□ -0
TRAV8-3A0A0A6YYJ7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV8-3A0A0A6YYJ7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
TRAV8-3A0A0A6YYJ7 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-3A0A0A6YYJ7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-3A0A0A6YYJ7 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-3A0A0A6YYJ7 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-3A0A0A6YYJ7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-3A0A0A6YYJ7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-3A0A0A6YYJ7 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-3A0A0A6YYJ7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC15.04■□□□□ -0
TRAV8-3A0A0A6YYJ7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC15.04■□□□□ -0
TRAV8-3A0A0A6YYJ7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-3A0A0A6YYJ7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-3A0A0A6YYJ7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-3A0A0A6YYJ7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-3A0A0A6YYJ7 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
TRAV8-3A0A0A6YYJ7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-3A0A0A6YYJ7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC15.04■□□□□ -0
TRAV8-3A0A0A6YYJ7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC15.04■□□□□ -0
TRAV8-3A0A0A6YYJ7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-3A0A0A6YYJ7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TRAV8-3A0A0A6YYJ7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-3A0A0A6YYJ7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-3A0A0A6YYJ7 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TRAV8-3A0A0A6YYJ7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.03■□□□□ -0
TRAV8-3A0A0A6YYJ7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-3A0A0A6YYJ7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-3A0A0A6YYJ7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC15.03■□□□□ -0
TRAV8-3A0A0A6YYJ7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-3A0A0A6YYJ7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC15.03■□□□□ -0
TRAV8-3A0A0A6YYJ7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-3A0A0A6YYJ7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC15.03■□□□□ -0
TRAV8-3A0A0A6YYJ7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC15.03■□□□□ -0
TRAV8-3A0A0A6YYJ7 AC009086.3-201ENST00000623486 1008 ntBASIC15.03■□□□□ -0
TRAV8-3A0A0A6YYJ7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-3A0A0A6YYJ7 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-3A0A0A6YYJ7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-3A0A0A6YYJ7 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-3A0A0A6YYJ7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV8-3A0A0A6YYJ7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
TRAV8-3A0A0A6YYJ7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV8-3A0A0A6YYJ7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV8-3A0A0A6YYJ7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV8-3A0A0A6YYJ7 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.02■□□□□ -0
TRAV8-3A0A0A6YYJ7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV8-3A0A0A6YYJ7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
TRAV8-3A0A0A6YYJ7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV8-3A0A0A6YYJ7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC15.02■□□□□ -0
TRAV8-3A0A0A6YYJ7 DUX4L4-201ENST00000566884 1269 ntBASIC15.02■□□□□ -0
TRAV8-3A0A0A6YYJ7 MIR4466-201ENST00000606121 54 ntBASIC15.02■□□□□ -0
TRAV8-3A0A0A6YYJ7 RASSF1-AS1-201ENST00000629828 790 ntBASIC15.02■□□□□ -0
TRAV8-3A0A0A6YYJ7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC15.02□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC15.01□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 AC099791.2-201ENST00000605725 427 ntBASIC15.01□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 SYT6-210ENST00000641643 1587 ntBASIC15.01□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC15.01□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV8-3A0A0A6YYJ7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms