Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV26-1A0A087WT03 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
TRAV26-1A0A087WT03 TSPY26P-201ENST00000476365 1326 ntBASIC15.34■□□□□ 0.05
TRAV26-1A0A087WT03 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV26-1A0A087WT03 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRAV26-1A0A087WT03 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
TRAV26-1A0A087WT03 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV26-1A0A087WT03 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV26-1A0A087WT03 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
TRAV26-1A0A087WT03 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
TRAV26-1A0A087WT03 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV26-1A0A087WT03 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
TRAV26-1A0A087WT03 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRAV26-1A0A087WT03 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAV26-1A0A087WT03 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC15.33■□□□□ 0.04
TRAV26-1A0A087WT03 STOX2-205ENST00000513034 807 ntTSL 3 BASIC15.33■□□□□ 0.04
TRAV26-1A0A087WT03 IGHV3-19-201ENST00000521488 291 ntBASIC15.33■□□□□ 0.04
TRAV26-1A0A087WT03 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV26-1A0A087WT03 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC15.33■□□□□ 0.04
TRAV26-1A0A087WT03 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV26-1A0A087WT03 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV26-1A0A087WT03 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV26-1A0A087WT03 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
TRAV26-1A0A087WT03 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV26-1A0A087WT03 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV26-1A0A087WT03 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV26-1A0A087WT03 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV26-1A0A087WT03 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV26-1A0A087WT03 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRAV26-1A0A087WT03 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV26-1A0A087WT03 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV26-1A0A087WT03 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV26-1A0A087WT03 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV26-1A0A087WT03 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAV26-1A0A087WT03 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRAV26-1A0A087WT03 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRAV26-1A0A087WT03 USP45-205ENST00000472914 1617 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV26-1A0A087WT03 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TRAV26-1A0A087WT03 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV26-1A0A087WT03 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
TRAV26-1A0A087WT03 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV26-1A0A087WT03 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAV26-1A0A087WT03 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV26-1A0A087WT03 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRAV26-1A0A087WT03 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV26-1A0A087WT03 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV26-1A0A087WT03 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRAV26-1A0A087WT03 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV26-1A0A087WT03 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRAV26-1A0A087WT03 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV26-1A0A087WT03 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRAV26-1A0A087WT03 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRAV26-1A0A087WT03 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV26-1A0A087WT03 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV26-1A0A087WT03 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV26-1A0A087WT03 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV26-1A0A087WT03 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV26-1A0A087WT03 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV26-1A0A087WT03 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC15.31■□□□□ 0.04
TRAV26-1A0A087WT03 AC010141.3-201ENST00000456659 717 ntBASIC15.31■□□□□ 0.04
TRAV26-1A0A087WT03 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV26-1A0A087WT03 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TRAV26-1A0A087WT03 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRAV26-1A0A087WT03 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV26-1A0A087WT03 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV26-1A0A087WT03 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV26-1A0A087WT03 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TRAV26-1A0A087WT03 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV26-1A0A087WT03 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TRAV26-1A0A087WT03 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV26-1A0A087WT03 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAV26-1A0A087WT03 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV26-1A0A087WT03 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV26-1A0A087WT03 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV26-1A0A087WT03 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAV26-1A0A087WT03 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
TRAV26-1A0A087WT03 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TRAV26-1A0A087WT03 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV26-1A0A087WT03 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAV26-1A0A087WT03 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV26-1A0A087WT03 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TRAV26-1A0A087WT03 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAV26-1A0A087WT03 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC15.3■□□□□ 0.04
TRAV26-1A0A087WT03 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV26-1A0A087WT03 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV26-1A0A087WT03 AC007952.6-201ENST00000573168 2673 ntBASIC15.3■□□□□ 0.04
TRAV26-1A0A087WT03 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV26-1A0A087WT03 AC003957.1-201ENST00000625108 2673 ntBASIC15.3■□□□□ 0.04
TRAV26-1A0A087WT03 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV26-1A0A087WT03 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV26-1A0A087WT03 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TRAV26-1A0A087WT03 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV26-1A0A087WT03 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAV26-1A0A087WT03 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
TRAV26-1A0A087WT03 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV26-1A0A087WT03 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAV26-1A0A087WT03 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAV26-1A0A087WT03 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TRAV26-1A0A087WT03 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV26-1A0A087WT03 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms