Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV9-2A0A087WT02 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV9-2A0A087WT02 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
TRAV9-2A0A087WT02 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
TRAV9-2A0A087WT02 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV9-2A0A087WT02 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV9-2A0A087WT02 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV9-2A0A087WT02 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV9-2A0A087WT02 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TRAV9-2A0A087WT02 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAV9-2A0A087WT02 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV9-2A0A087WT02 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV9-2A0A087WT02 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV9-2A0A087WT02 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
TRAV9-2A0A087WT02 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TRAV9-2A0A087WT02 GUSBP5-201ENST00000418136 578 ntBASIC15.8■□□□□ 0.12
TRAV9-2A0A087WT02 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC15.8■□□□□ 0.12
TRAV9-2A0A087WT02 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV9-2A0A087WT02 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV9-2A0A087WT02 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV9-2A0A087WT02 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV9-2A0A087WT02 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV9-2A0A087WT02 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC15.8■□□□□ 0.12
TRAV9-2A0A087WT02 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV9-2A0A087WT02 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV9-2A0A087WT02 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV9-2A0A087WT02 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TRAV9-2A0A087WT02 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV9-2A0A087WT02 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TRAV9-2A0A087WT02 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV9-2A0A087WT02 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
TRAV9-2A0A087WT02 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV9-2A0A087WT02 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV9-2A0A087WT02 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV9-2A0A087WT02 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV9-2A0A087WT02 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
TRAV9-2A0A087WT02 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV9-2A0A087WT02 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV9-2A0A087WT02 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV9-2A0A087WT02 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV9-2A0A087WT02 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV9-2A0A087WT02 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TRAV9-2A0A087WT02 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV9-2A0A087WT02 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV9-2A0A087WT02 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAV9-2A0A087WT02 AC092028.1-203ENST00000608262 953 ntBASIC15.79■□□□□ 0.12
TRAV9-2A0A087WT02 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TRAV9-2A0A087WT02 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV9-2A0A087WT02 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV9-2A0A087WT02 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
TRAV9-2A0A087WT02 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
TRAV9-2A0A087WT02 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV9-2A0A087WT02 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV9-2A0A087WT02 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV9-2A0A087WT02 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV9-2A0A087WT02 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
TRAV9-2A0A087WT02 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV9-2A0A087WT02 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV9-2A0A087WT02 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV9-2A0A087WT02 AL161729.1-201ENST00000604104 1402 ntBASIC15.78■□□□□ 0.12
TRAV9-2A0A087WT02 AC244015.2-201ENST00000616358 1861 ntBASIC15.78■□□□□ 0.12
TRAV9-2A0A087WT02 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV9-2A0A087WT02 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV9-2A0A087WT02 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV9-2A0A087WT02 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TRAV9-2A0A087WT02 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV9-2A0A087WT02 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV9-2A0A087WT02 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV9-2A0A087WT02 TK2-202ENST00000417693 1046 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV9-2A0A087WT02 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
TRAV9-2A0A087WT02 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV9-2A0A087WT02 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV9-2A0A087WT02 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
TRAV9-2A0A087WT02 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV9-2A0A087WT02 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV9-2A0A087WT02 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV9-2A0A087WT02 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV9-2A0A087WT02 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV9-2A0A087WT02 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TRAV9-2A0A087WT02 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV9-2A0A087WT02 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV9-2A0A087WT02 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV9-2A0A087WT02 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
TRAV9-2A0A087WT02 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC15.77■□□□□ 0.12
TRAV9-2A0A087WT02 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV9-2A0A087WT02 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC15.77■□□□□ 0.12
TRAV9-2A0A087WT02 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC15.77■□□□□ 0.12
TRAV9-2A0A087WT02 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV9-2A0A087WT02 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC15.77■□□□□ 0.12
TRAV9-2A0A087WT02 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC15.77■□□□□ 0.11
TRAV9-2A0A087WT02 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC15.77■□□□□ 0.11
TRAV9-2A0A087WT02 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV9-2A0A087WT02 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
TRAV9-2A0A087WT02 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV9-2A0A087WT02 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
TRAV9-2A0A087WT02 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
TRAV9-2A0A087WT02 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV9-2A0A087WT02 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TRAV9-2A0A087WT02 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
TRAV9-2A0A087WT02 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms