Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV9-1A0A075B6T8 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV9-1A0A075B6T8 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV9-1A0A075B6T8 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TRAV9-1A0A075B6T8 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV9-1A0A075B6T8 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV9-1A0A075B6T8 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV9-1A0A075B6T8 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV9-1A0A075B6T8 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV9-1A0A075B6T8 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRAV9-1A0A075B6T8 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV9-1A0A075B6T8 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV9-1A0A075B6T8 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TRAV9-1A0A075B6T8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV9-1A0A075B6T8 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRAV9-1A0A075B6T8 C17orf82-201ENST00000623772 1530 ntBASIC16.04■□□□□ 0.16
TRAV9-1A0A075B6T8 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV9-1A0A075B6T8 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV9-1A0A075B6T8 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV9-1A0A075B6T8 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
TRAV9-1A0A075B6T8 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TRAV9-1A0A075B6T8 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV9-1A0A075B6T8 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV9-1A0A075B6T8 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV9-1A0A075B6T8 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV9-1A0A075B6T8 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRAV9-1A0A075B6T8 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRAV9-1A0A075B6T8 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV9-1A0A075B6T8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV9-1A0A075B6T8 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TRAV9-1A0A075B6T8 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV9-1A0A075B6T8 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV9-1A0A075B6T8 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV9-1A0A075B6T8 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV9-1A0A075B6T8 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV9-1A0A075B6T8 AC073314.1-201ENST00000568729 2216 ntBASIC16.03■□□□□ 0.16
TRAV9-1A0A075B6T8 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV9-1A0A075B6T8 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV9-1A0A075B6T8 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV9-1A0A075B6T8 AGPS-202ENST00000409888 815 ntTSL 4 BASIC16.03■□□□□ 0.16
TRAV9-1A0A075B6T8 ECEL1P2-201ENST00000461596 1295 ntBASIC16.03■□□□□ 0.16
TRAV9-1A0A075B6T8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV9-1A0A075B6T8 AC011551.1-201ENST00000614101 683 ntBASIC16.03■□□□□ 0.16
TRAV9-1A0A075B6T8 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV9-1A0A075B6T8 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV9-1A0A075B6T8 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV9-1A0A075B6T8 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV9-1A0A075B6T8 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV9-1A0A075B6T8 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV9-1A0A075B6T8 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV9-1A0A075B6T8 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV9-1A0A075B6T8 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV9-1A0A075B6T8 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC16.03■□□□□ 0.16
TRAV9-1A0A075B6T8 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV9-1A0A075B6T8 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV9-1A0A075B6T8 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV9-1A0A075B6T8 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV9-1A0A075B6T8 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV9-1A0A075B6T8 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV9-1A0A075B6T8 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV9-1A0A075B6T8 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV9-1A0A075B6T8 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV9-1A0A075B6T8 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV9-1A0A075B6T8 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
TRAV9-1A0A075B6T8 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC16.02■□□□□ 0.16
TRAV9-1A0A075B6T8 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV9-1A0A075B6T8 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV9-1A0A075B6T8 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TRAV9-1A0A075B6T8 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV9-1A0A075B6T8 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV9-1A0A075B6T8 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAV9-1A0A075B6T8 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.02■□□□□ 0.16
TRAV9-1A0A075B6T8 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.02■□□□□ 0.16
TRAV9-1A0A075B6T8 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV9-1A0A075B6T8 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
TRAV9-1A0A075B6T8 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAV9-1A0A075B6T8 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAV9-1A0A075B6T8 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV9-1A0A075B6T8 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV9-1A0A075B6T8 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV9-1A0A075B6T8 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.02■□□□□ 0.15
TRAV9-1A0A075B6T8 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
TRAV9-1A0A075B6T8 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.02■□□□□ 0.15
TRAV9-1A0A075B6T8 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV9-1A0A075B6T8 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.02■□□□□ 0.15
TRAV9-1A0A075B6T8 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV9-1A0A075B6T8 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV9-1A0A075B6T8 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV9-1A0A075B6T8 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV9-1A0A075B6T8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV9-1A0A075B6T8 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV9-1A0A075B6T8 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
TRAV9-1A0A075B6T8 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV9-1A0A075B6T8 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAV9-1A0A075B6T8 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV9-1A0A075B6T8 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV9-1A0A075B6T8 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV9-1A0A075B6T8 AC009086.3-201ENST00000623486 1008 ntBASIC16.01■□□□□ 0.15
TRAV9-1A0A075B6T8 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAV9-1A0A075B6T8 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms