Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ADH7-204ENST00000476959 1325 ntTSL 2 BASIC10.58□□□□□ -0.72
NPIPA3F8WFD2 AC010536.1-201ENST00000538868 2611 ntBASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 GTF3C1-201ENST00000356183 7018 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 DPT-201ENST00000367817 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 IGSF1-202ENST00000370900 1786 ntTSL 2 BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 GPD1-201ENST00000301149 3082 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 GREB1L-209ENST00000580732 8749 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 SCN1B-208ENST00000640135 4846 ntTSL 5 BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 BEND3P1-202ENST00000449695 2762 ntTSL 4 BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 MYO7B-203ENST00000428314 6715 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 TMEM220-201ENST00000341871 3106 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 RBM7-203ENST00000540163 4243 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 ACAD11-201ENST00000264990 4142 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 BTBD11-202ENST00000357167 4107 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 AC099494.1-201ENST00000624763 1370 ntBASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 WISP1-201ENST00000220856 1205 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 NAALAD2-202ENST00000375944 1149 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 MIR1249-201ENST00000408671 66 ntBASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 AL355994.4-201ENST00000416882 563 ntBASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 AL049795.1-202ENST00000421616 786 ntTSL 3 BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 MPRIP-AS1-201ENST00000428367 1058 ntTSL 3 BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 AL356056.2-202ENST00000430188 553 ntTSL 2 BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 IMMP2L-203ENST00000437687 243 ntTSL 2 BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 AL139412.1-201ENST00000441085 523 ntTSL 2 BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 AC006965.1-201ENST00000445747 959 ntBASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 RN7SL292P-201ENST00000473305 266 ntBASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 RN7SL801P-201ENST00000479462 302 ntBASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 SUB1-213ENST00000515355 771 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 AF186192.1-201ENST00000525376 572 ntBASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 TIMM10B-203ENST00000530751 809 ntTSL 2 BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 MGAT4EP-202ENST00000549576 936 ntBASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 BCAR1P2-201ENST00000557707 636 ntBASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 AP001505.1-201ENST00000569966 824 ntBASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 MIR4747-201ENST00000584057 54 ntBASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 AC104982.2-201ENST00000584258 893 ntTSL 5 BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 AC009005.1-202ENST00000588908 625 ntTSL 2 BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 AC010328.3-201ENST00000600068 553 ntTSL 4 BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 AC008537.1-201ENST00000601627 575 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 ASMTL-AS1-205ENST00000602357 435 ntTSL 2 BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 AC138907.9-201ENST00000623747 986 ntBASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 AL139353.3-201ENST00000635085 411 ntBASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 AC002511.3-201ENST00000638098 420 ntBASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 PKD2-205ENST00000508588 1720 ntTSL 2 BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 RIPOR1-201ENST00000042381 4051 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 PLEC-201ENST00000322810 15249 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 TMCC2-208ENST00000545499 3339 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 ATG4C-203ENST00000371120 2890 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 PPIG-208ENST00000462903 1516 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 HIST1H2BG-201ENST00000541790 1534 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 EFR3B-204ENST00000403714 7434 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 ANGEL1-201ENST00000251089 5176 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 DUOXA1-208ENST00000558996 2684 ntTSL 2 BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 CTCFL-209ENST00000433949 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 FAM69A-201ENST00000370310 2574 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 NR2C2-203ENST00000406272 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 LRTM1-202ENST00000493075 1318 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 MPP2-202ENST00000377184 4206 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
NPIPA3F8WFD2 MCM7-201ENST00000303887 2957 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 LGALS8-206ENST00000366584 4369 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 GTF2A2-202ENST00000396060 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 DAPK1-209ENST00000472284 5759 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 MARCH7-209ENST00000539065 3303 ntTSL 2 BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 RASGRP4-207ENST00000587738 2293 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 KCTD7-207ENST00000639879 5098 ntTSL 4 BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 CMC1-205ENST00000466830 6033 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 CES2-202ENST00000417689 3868 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 GPR61-207ENST00000618721 2823 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 ANKRD34B-201ENST00000338682 3938 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 VAPB-204ENST00000475243 7936 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 LINC00619-201ENST00000374432 1121 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 KCNIP1-202ENST00000377360 1197 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 AL356414.1-201ENST00000379526 686 ntTSL 3 BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 KRTAP19-1-201ENST00000390689 646 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 IGLV8OR8-1-201ENST00000399730 352 ntBASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 CST13P-203ENST00000413633 1152 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 AL117329.2-201ENST00000413815 740 ntBASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 NTM-IT-201ENST00000421651 373 ntTSL 3 BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 AC011290.1-201ENST00000439751 414 ntTSL 5 BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 AC074366.1-204ENST00000446277 552 ntTSL 3 BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 LINC01099-201ENST00000507011 512 ntTSL 5 BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 LINC01099-202ENST00000512527 578 ntTSL 2 BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 ENPP7P12-201ENST00000526818 631 ntBASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 ENPP7P6-201ENST00000529817 929 ntBASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 CCND2-AS1-201ENST00000539135 555 ntTSL 3 BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 KRT127P-201ENST00000547183 433 ntBASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 AC025265.1-202ENST00000550029 738 ntTSL 5 BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 AC008567.1-201ENST00000567299 1192 ntBASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 AC026464.4-201ENST00000570054 1284 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 AC007922.2-201ENST00000579049 281 ntTSL 3 BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 AC016590.1-201ENST00000588763 420 ntTSL 2 BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 AC006272.1-201ENST00000596964 552 ntTSL 4 BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 AL360272.1-201ENST00000605501 585 ntBASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 TRAPPC2L-215ENST00000625770 281 ntTSL 2 BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 NWD1-204ENST00000524140 7641 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 ZNF592-201ENST00000299927 7863 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 ADAM22-201ENST00000265727 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 ACOX3-201ENST00000356406 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 GALK2-212ENST00000559454 1768 ntTSL 5 BASIC10.56□□□□□ -0.72
NPIPA3F8WFD2 FNIP2-201ENST00000264433 6925 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 574.9 ms