Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 LYZL6-203ENST00000618542 917 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MTHFRP42898 OR7E22P-202ENST00000641331 1154 ntBASIC12.23□□□□□ -0.45
MTHFRP42898 OR7E22P-203ENST00000641370 1242 ntBASIC12.23□□□□□ -0.45
MTHFRP42898 TBC1D8-201ENST00000376840 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MTHFRP42898 NPC1L1-204ENST00000546276 4826 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MTHFRP42898 AL121772.1-201ENST00000618303 2335 ntTSL 2 BASIC12.23□□□□□ -0.45
MTHFRP42898 STIM1-209ENST00000527651 2184 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MTHFRP42898 GOLGA2P1-201ENST00000512938 2906 ntBASIC12.23□□□□□ -0.45
MTHFRP42898 PPP1R18-202ENST00000399199 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MTHFRP42898 ZKSCAN3-201ENST00000252211 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MTHFRP42898 KDM7A-201ENST00000397560 9272 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
MTHFRP42898 CDC25B-201ENST00000245960 3597 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
MTHFRP42898 ANKRD20A8P-201ENST00000432432 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MTHFRP42898 GMPS-203ENST00000496455 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MTHFRP42898 RFX5-202ENST00000368870 2459 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
MTHFRP42898 AL353593.1-201ENST00000602517 3955 ntBASIC12.22□□□□□ -0.45
MTHFRP42898 OPRK1-206ENST00000613482 4682 ntTSL 5 BASIC12.22□□□□□ -0.45
MTHFRP42898 BARD1-212ENST00000617164 5449 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
MTHFRP42898 ECHDC1-209ENST00000454591 1515 ntTSL 2 BASIC12.22□□□□□ -0.45
MTHFRP42898 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
MTHFRP42898 DAB1-205ENST00000371236 5298 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
MTHFRP42898 AP4S1-205ENST00000554345 1491 ntTSL 3 BASIC12.22□□□□□ -0.45
MTHFRP42898 C12orf74-202ENST00000544406 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
MTHFRP42898 P4HA1-201ENST00000263556 2844 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
MTHFRP42898 P4HA1-204ENST00000394890 2844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MTHFRP42898 ATP7B-203ENST00000400366 6304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
MTHFRP42898 EIF4E2-203ENST00000409167 1372 ntTSL 2 BASIC12.22□□□□□ -0.45
MTHFRP42898 SLC22A8-205ENST00000535878 1387 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
MTHFRP42898 SCML1-204ENST00000398080 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
MTHFRP42898 SPTY2D1-201ENST00000336349 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MTHFRP42898 POTEH-201ENST00000343518 1928 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
MTHFRP42898 AC092159.2-201ENST00000445418 1943 ntTSL 2 BASIC12.22□□□□□ -0.45
MTHFRP42898 VAMP8-201ENST00000263864 774 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MTHFRP42898 FBXO16-201ENST00000346498 1205 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
MTHFRP42898 LUADT1-201ENST00000359838 453 ntTSL 5 BASIC12.22□□□□□ -0.45
MTHFRP42898 DLG3-AS1-201ENST00000424211 432 ntTSL 2 BASIC12.22□□□□□ -0.45
MTHFRP42898 NREP-208ENST00000453526 559 ntAPPRIS P1 TSL 4 BASIC12.22□□□□□ -0.45
MTHFRP42898 AP001625.1-202ENST00000455116 450 ntTSL 3 BASIC12.22□□□□□ -0.45
MTHFRP42898 VAMP7-203ENST00000460621 658 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
MTHFRP42898 RPL24-203ENST00000469605 799 ntTSL 2 BASIC12.22□□□□□ -0.45
MTHFRP42898 BNC2-207ENST00000471301 745 ntTSL 3 BASIC12.22□□□□□ -0.45
MTHFRP42898 DLEU1-219ENST00000476738 838 ntTSL 5 BASIC12.22□□□□□ -0.45
MTHFRP42898 AC079942.1-201ENST00000505557 384 ntTSL 3 BASIC12.22□□□□□ -0.45
MTHFRP42898 AC092611.2-201ENST00000508664 304 ntTSL 3 BASIC12.22□□□□□ -0.45
MTHFRP42898 TUBB8P3-201ENST00000510182 803 ntBASIC12.22□□□□□ -0.45
MTHFRP42898 ACTBP2-201ENST00000515712 1123 ntBASIC12.22□□□□□ -0.45
MTHFRP42898 AC069120.3-201ENST00000519764 537 ntTSL 4 BASIC12.22□□□□□ -0.45
MTHFRP42898 RBM4-212ENST00000532968 757 ntTSL 2 BASIC12.22□□□□□ -0.45
MTHFRP42898 NUDT5-209ENST00000537776 1201 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
MTHFRP42898 AC145350.2-202ENST00000564165 685 ntTSL 5 BASIC12.22□□□□□ -0.45
MTHFRP42898 COX6B2-207ENST00000589467 479 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MTHFRP42898 MIR7847-201ENST00000610912 103 ntBASIC12.22□□□□□ -0.45
MTHFRP42898 FP700107.1-201ENST00000615237 1178 ntBASIC12.22□□□□□ -0.45
MTHFRP42898 AL356585.3-201ENST00000625196 1017 ntBASIC12.22□□□□□ -0.45
MTHFRP42898 LCMT2-201ENST00000305641 6957 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
MTHFRP42898 DLC1-210ENST00000512044 3758 ntTSL 2 BASIC12.22□□□□□ -0.45
MTHFRP42898 DIO1-202ENST00000361921 1861 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
MTHFRP42898 SEC61A1-203ENST00000464451 1871 ntTSL 2 BASIC12.22□□□□□ -0.45
MTHFRP42898 SALL4P1-201ENST00000510352 1860 ntBASIC12.22□□□□□ -0.45
MTHFRP42898 SLC2A1-203ENST00000426263 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MTHFRP42898 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MTHFRP42898 CA3-201ENST00000285381 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MTHFRP42898 BTN3A1-208ENST00000476549 1758 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
MTHFRP42898 ZIK1-202ENST00000536878 4144 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
MTHFRP42898 ZNF839-209ENST00000559185 2905 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
MTHFRP42898 WBP1L-202ENST00000448841 4085 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
MTHFRP42898 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
MTHFRP42898 LINC00452-202ENST00000609661 2896 ntTSL 5 BASIC12.22□□□□□ -0.45
MTHFRP42898 GRAMD1B-203ENST00000456860 2805 ntTSL 2 BASIC12.22□□□□□ -0.45
MTHFRP42898 BCL2L11-206ENST00000393256 5086 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
MTHFRP42898 IL1RAP-211ENST00000439062 2244 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
MTHFRP42898 PES1-203ENST00000402281 2760 ntTSL 2 BASIC12.22□□□□□ -0.45
MTHFRP42898 SLC5A10-201ENST00000317977 4436 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
MTHFRP42898 STAU2-214ENST00000521451 2712 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
MTHFRP42898 PAPLN-208ENST00000555445 4282 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
MTHFRP42898 PARG-207ENST00000616448 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MTHFRP42898 CAP1-204ENST00000372798 1563 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
MTHFRP42898 ZNF202-201ENST00000336139 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MTHFRP42898 TJP2-201ENST00000348208 4058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
MTHFRP42898 LARP1-201ENST00000336314 6595 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MTHFRP42898 DLEC1-201ENST00000308059 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
MTHFRP42898 SEMA6A-202ENST00000343348 6878 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MTHFRP42898 ACBD5-205ENST00000396271 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
MTHFRP42898 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
MTHFRP42898 AC004847.1-201ENST00000568457 1911 ntBASIC12.21□□□□□ -0.45
MTHFRP42898 HNRNPA1P6-202ENST00000631770 1447 ntBASIC12.21□□□□□ -0.45
MTHFRP42898 NEK1-201ENST00000439128 5653 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
MTHFRP42898 ANKRD13A-201ENST00000261739 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MTHFRP42898 RIPOR1-202ENST00000379312 4116 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
MTHFRP42898 SPDYA-201ENST00000334056 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MTHFRP42898 SEPT9-204ENST00000427180 3635 ntTSL 2 BASIC12.21□□□□□ -0.45
MTHFRP42898 ARHGEF9-221ENST00000635967 2179 ntTSL 5 BASIC12.21□□□□□ -0.45
MTHFRP42898 LINC01544-201ENST00000567801 5168 ntTSL 2 BASIC12.21□□□□□ -0.45
MTHFRP42898 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC12.21□□□□□ -0.45
MTHFRP42898 BPIFA3-201ENST00000375452 983 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
MTHFRP42898 MIR497-201ENST00000385056 112 ntBASIC12.21□□□□□ -0.45
MTHFRP42898 CCDC148-203ENST00000409889 1160 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
MTHFRP42898 ULK4-202ENST00000414606 647 ntTSL 4 BASIC12.21□□□□□ -0.45
MTHFRP42898 TAC3-205ENST00000415231 588 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
MTHFRP42898 AL360181.2-201ENST00000424450 626 ntTSL 5 BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms