Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDHGA6Q9Y5G7 ESRRAP2-201ENST00000418437 1549 ntBASIC20.6■□□□□ 0.89
PCDHGA6Q9Y5G7 BX005040.4-201ENST00000637145 1518 ntBASIC20.6■□□□□ 0.89
PCDHGA6Q9Y5G7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA6Q9Y5G7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA6Q9Y5G7 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.6■□□□□ 0.89
PCDHGA6Q9Y5G7 AC087239.1-201ENST00000622671 572 ntBASIC20.6■□□□□ 0.89
PCDHGA6Q9Y5G7 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA6Q9Y5G7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA6Q9Y5G7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA6Q9Y5G7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
PCDHGA6Q9Y5G7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA6Q9Y5G7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA6Q9Y5G7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDHGA6Q9Y5G7 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PCDHGA6Q9Y5G7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA6Q9Y5G7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA6Q9Y5G7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PCDHGA6Q9Y5G7 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA6Q9Y5G7 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.59■□□□□ 0.89
PCDHGA6Q9Y5G7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.59■□□□□ 0.89
PCDHGA6Q9Y5G7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDHGA6Q9Y5G7 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.59■□□□□ 0.89
PCDHGA6Q9Y5G7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
PCDHGA6Q9Y5G7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDHGA6Q9Y5G7 AC004687.1-201ENST00000579003 1625 ntBASIC20.59■□□□□ 0.89
PCDHGA6Q9Y5G7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.58■□□□□ 0.89
PCDHGA6Q9Y5G7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGA6Q9Y5G7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGA6Q9Y5G7 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGA6Q9Y5G7 AC010141.3-201ENST00000456659 717 ntBASIC20.58■□□□□ 0.89
PCDHGA6Q9Y5G7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.58■□□□□ 0.89
PCDHGA6Q9Y5G7 KRT18P61-201ENST00000585825 1298 ntBASIC20.58■□□□□ 0.89
PCDHGA6Q9Y5G7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.58■□□□□ 0.89
PCDHGA6Q9Y5G7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.58■□□□□ 0.89
PCDHGA6Q9Y5G7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.58■□□□□ 0.88
PCDHGA6Q9Y5G7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHGA6Q9Y5G7 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.58■□□□□ 0.88
PCDHGA6Q9Y5G7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGA6Q9Y5G7 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGA6Q9Y5G7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
PCDHGA6Q9Y5G7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PCDHGA6Q9Y5G7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGA6Q9Y5G7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGA6Q9Y5G7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDHGA6Q9Y5G7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGA6Q9Y5G7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGA6Q9Y5G7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDHGA6Q9Y5G7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDHGA6Q9Y5G7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGA6Q9Y5G7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGA6Q9Y5G7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA6Q9Y5G7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA6Q9Y5G7 AL024507.2-201ENST00000606070 2574 ntBASIC20.56■□□□□ 0.88
PCDHGA6Q9Y5G7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA6Q9Y5G7 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PCDHGA6Q9Y5G7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDHGA6Q9Y5G7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA6Q9Y5G7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA6Q9Y5G7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA6Q9Y5G7 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.56■□□□□ 0.88
PCDHGA6Q9Y5G7 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA6Q9Y5G7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA6Q9Y5G7 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PCDHGA6Q9Y5G7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PCDHGA6Q9Y5G7 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.56■□□□□ 0.88
PCDHGA6Q9Y5G7 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA6Q9Y5G7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
PCDHGA6Q9Y5G7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA6Q9Y5G7 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA6Q9Y5G7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA6Q9Y5G7 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA6Q9Y5G7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.55■□□□□ 0.88
PCDHGA6Q9Y5G7 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PCDHGA6Q9Y5G7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.55■□□□□ 0.88
PCDHGA6Q9Y5G7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA6Q9Y5G7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDHGA6Q9Y5G7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
PCDHGA6Q9Y5G7 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA6Q9Y5G7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDHGA6Q9Y5G7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA6Q9Y5G7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA6Q9Y5G7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA6Q9Y5G7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA6Q9Y5G7 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.55■□□□□ 0.88
PCDHGA6Q9Y5G7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
PCDHGA6Q9Y5G7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PCDHGA6Q9Y5G7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
PCDHGA6Q9Y5G7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA6Q9Y5G7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA6Q9Y5G7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA6Q9Y5G7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDHGA6Q9Y5G7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA6Q9Y5G7 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDHGA6Q9Y5G7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.54■□□□□ 0.88
PCDHGA6Q9Y5G7 AC137761.2-201ENST00000561729 223 ntBASIC20.54■□□□□ 0.88
PCDHGA6Q9Y5G7 AC145350.3-201ENST00000569033 163 ntBASIC20.54■□□□□ 0.88
PCDHGA6Q9Y5G7 SMUG1P1-201ENST00000590640 811 ntBASIC20.54■□□□□ 0.88
PCDHGA6Q9Y5G7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA6Q9Y5G7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms