Protein–RNA interactions for Protein: Q9Y5E3

PCDHB6, Protocadherin beta-6, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB6Q9Y5E3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC24.42■■□□□ 1.5
PCDHB6Q9Y5E3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHB6Q9Y5E3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHB6Q9Y5E3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC24.42■■□□□ 1.5
PCDHB6Q9Y5E3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC24.41■■□□□ 1.5
PCDHB6Q9Y5E3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHB6Q9Y5E3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHB6Q9Y5E3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHB6Q9Y5E3 AC026310.3-201ENST00000625186 2373 ntBASIC24.41■■□□□ 1.5
PCDHB6Q9Y5E3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC24.41■■□□□ 1.5
PCDHB6Q9Y5E3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC24.41■■□□□ 1.5
PCDHB6Q9Y5E3 AC005837.3-201ENST00000612163 286 ntBASIC24.41■■□□□ 1.5
PCDHB6Q9Y5E3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHB6Q9Y5E3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC24.41■■□□□ 1.5
PCDHB6Q9Y5E3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHB6Q9Y5E3 AC244015.2-201ENST00000616358 1861 ntBASIC24.41■■□□□ 1.5
PCDHB6Q9Y5E3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHB6Q9Y5E3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHB6Q9Y5E3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC24.4■■□□□ 1.5
PCDHB6Q9Y5E3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC24.4■■□□□ 1.5
PCDHB6Q9Y5E3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC24.4■■□□□ 1.5
PCDHB6Q9Y5E3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC24.4■■□□□ 1.5
PCDHB6Q9Y5E3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC24.4■■□□□ 1.5
PCDHB6Q9Y5E3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC24.4■■□□□ 1.5
PCDHB6Q9Y5E3 AL034346.1-201ENST00000568244 1277 ntBASIC24.4■■□□□ 1.5
PCDHB6Q9Y5E3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC24.39■■□□□ 1.5
PCDHB6Q9Y5E3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC24.39■■□□□ 1.5
PCDHB6Q9Y5E3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC24.39■■□□□ 1.49
PCDHB6Q9Y5E3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.49
PCDHB6Q9Y5E3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PCDHB6Q9Y5E3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC24.39■■□□□ 1.49
PCDHB6Q9Y5E3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
PCDHB6Q9Y5E3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHB6Q9Y5E3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHB6Q9Y5E3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC24.38■■□□□ 1.49
PCDHB6Q9Y5E3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
PCDHB6Q9Y5E3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHB6Q9Y5E3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
PCDHB6Q9Y5E3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHB6Q9Y5E3 MIR638-201ENST00000385237 100 ntBASIC24.38■■□□□ 1.49
PCDHB6Q9Y5E3 AC142381.2-201ENST00000566120 298 ntBASIC24.38■■□□□ 1.49
PCDHB6Q9Y5E3 AC105233.4-201ENST00000642045 216 ntBASIC24.38■■□□□ 1.49
PCDHB6Q9Y5E3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHB6Q9Y5E3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC24.38■■□□□ 1.49
PCDHB6Q9Y5E3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC24.38■■□□□ 1.49
PCDHB6Q9Y5E3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
PCDHB6Q9Y5E3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHB6Q9Y5E3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHB6Q9Y5E3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHB6Q9Y5E3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHB6Q9Y5E3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC24.37■■□□□ 1.49
PCDHB6Q9Y5E3 AL137060.1-201ENST00000618151 2648 ntBASIC24.37■■□□□ 1.49
PCDHB6Q9Y5E3 AC003102.1-202ENST00000563394 1796 ntBASIC24.37■■□□□ 1.49
PCDHB6Q9Y5E3 MIR572-201ENST00000384983 95 ntBASIC24.37■■□□□ 1.49
PCDHB6Q9Y5E3 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC24.37■■□□□ 1.49
PCDHB6Q9Y5E3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHB6Q9Y5E3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHB6Q9Y5E3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHB6Q9Y5E3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHB6Q9Y5E3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHB6Q9Y5E3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC24.36■■□□□ 1.49
PCDHB6Q9Y5E3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHB6Q9Y5E3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC24.36■■□□□ 1.49
PCDHB6Q9Y5E3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHB6Q9Y5E3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC24.36■■□□□ 1.49
PCDHB6Q9Y5E3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHB6Q9Y5E3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC24.36■■□□□ 1.49
PCDHB6Q9Y5E3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHB6Q9Y5E3 AP006587.3-201ENST00000525742 1516 ntBASIC24.35■■□□□ 1.49
PCDHB6Q9Y5E3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHB6Q9Y5E3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHB6Q9Y5E3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHB6Q9Y5E3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC24.35■■□□□ 1.49
PCDHB6Q9Y5E3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC24.35■■□□□ 1.49
PCDHB6Q9Y5E3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHB6Q9Y5E3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC24.35■■□□□ 1.49
PCDHB6Q9Y5E3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
PCDHB6Q9Y5E3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC24.34■■□□□ 1.49
PCDHB6Q9Y5E3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC24.34■■□□□ 1.49
PCDHB6Q9Y5E3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC24.34■■□□□ 1.49
PCDHB6Q9Y5E3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC24.34■■□□□ 1.49
PCDHB6Q9Y5E3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHB6Q9Y5E3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHB6Q9Y5E3 MTURN-203ENST00000409688 843 ntTSL 2 BASIC24.34■■□□□ 1.49
PCDHB6Q9Y5E3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC24.34■■□□□ 1.49
PCDHB6Q9Y5E3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
PCDHB6Q9Y5E3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
PCDHB6Q9Y5E3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC24.34■■□□□ 1.49
PCDHB6Q9Y5E3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC24.33■■□□□ 1.49
PCDHB6Q9Y5E3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PCDHB6Q9Y5E3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PCDHB6Q9Y5E3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC24.33■■□□□ 1.49
PCDHB6Q9Y5E3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
PCDHB6Q9Y5E3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PCDHB6Q9Y5E3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC24.33■■□□□ 1.48
PCDHB6Q9Y5E3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHB6Q9Y5E3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHB6Q9Y5E3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHB6Q9Y5E3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHB6Q9Y5E3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms