Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPH3AQ9Y2J0 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPH3AQ9Y2J0 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPH3AQ9Y2J0 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
RPH3AQ9Y2J0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.54■□□□□ 0.72
RPH3AQ9Y2J0 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
RPH3AQ9Y2J0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPH3AQ9Y2J0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPH3AQ9Y2J0 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RPH3AQ9Y2J0 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RPH3AQ9Y2J0 AC123595.1-201ENST00000440769 1046 ntBASIC19.54■□□□□ 0.72
RPH3AQ9Y2J0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPH3AQ9Y2J0 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPH3AQ9Y2J0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPH3AQ9Y2J0 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPH3AQ9Y2J0 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPH3AQ9Y2J0 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPH3AQ9Y2J0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.54■□□□□ 0.72
RPH3AQ9Y2J0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPH3AQ9Y2J0 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.53■□□□□ 0.72
RPH3AQ9Y2J0 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPH3AQ9Y2J0 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPH3AQ9Y2J0 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.53■□□□□ 0.72
RPH3AQ9Y2J0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RPH3AQ9Y2J0 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPH3AQ9Y2J0 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.53■□□□□ 0.72
RPH3AQ9Y2J0 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.53■□□□□ 0.72
RPH3AQ9Y2J0 CCDC92B-201ENST00000575506 885 ntBASIC19.53■□□□□ 0.72
RPH3AQ9Y2J0 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.53■□□□□ 0.72
RPH3AQ9Y2J0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.53■□□□□ 0.72
RPH3AQ9Y2J0 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RPH3AQ9Y2J0 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
RPH3AQ9Y2J0 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RPH3AQ9Y2J0 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPH3AQ9Y2J0 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPH3AQ9Y2J0 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.52■□□□□ 0.72
RPH3AQ9Y2J0 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RPH3AQ9Y2J0 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPH3AQ9Y2J0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPH3AQ9Y2J0 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RPH3AQ9Y2J0 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RPH3AQ9Y2J0 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
RPH3AQ9Y2J0 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
RPH3AQ9Y2J0 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
RPH3AQ9Y2J0 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.51■□□□□ 0.71
RPH3AQ9Y2J0 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPH3AQ9Y2J0 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPH3AQ9Y2J0 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.51■□□□□ 0.71
RPH3AQ9Y2J0 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.51■□□□□ 0.71
RPH3AQ9Y2J0 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RPH3AQ9Y2J0 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.51■□□□□ 0.71
RPH3AQ9Y2J0 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.51■□□□□ 0.71
RPH3AQ9Y2J0 TPRG1LP1-201ENST00000598702 760 ntBASIC19.51■□□□□ 0.71
RPH3AQ9Y2J0 IKBKGP1-201ENST00000612193 1073 ntBASIC19.51■□□□□ 0.71
RPH3AQ9Y2J0 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.51■□□□□ 0.71
RPH3AQ9Y2J0 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.51■□□□□ 0.71
RPH3AQ9Y2J0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.51■□□□□ 0.71
RPH3AQ9Y2J0 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RPH3AQ9Y2J0 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPH3AQ9Y2J0 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RPH3AQ9Y2J0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPH3AQ9Y2J0 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
RPH3AQ9Y2J0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RPH3AQ9Y2J0 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPH3AQ9Y2J0 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPH3AQ9Y2J0 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPH3AQ9Y2J0 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPH3AQ9Y2J0 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
RPH3AQ9Y2J0 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.5■□□□□ 0.71
RPH3AQ9Y2J0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
RPH3AQ9Y2J0 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RPH3AQ9Y2J0 KRT18P14-201ENST00000534205 1250 ntBASIC19.5■□□□□ 0.71
RPH3AQ9Y2J0 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPH3AQ9Y2J0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPH3AQ9Y2J0 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RPH3AQ9Y2J0 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RPH3AQ9Y2J0 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
RPH3AQ9Y2J0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.5■□□□□ 0.71
RPH3AQ9Y2J0 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPH3AQ9Y2J0 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RPH3AQ9Y2J0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.5■□□□□ 0.71
RPH3AQ9Y2J0 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPH3AQ9Y2J0 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPH3AQ9Y2J0 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RPH3AQ9Y2J0 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
RPH3AQ9Y2J0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.49■□□□□ 0.71
RPH3AQ9Y2J0 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPH3AQ9Y2J0 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RPH3AQ9Y2J0 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
RPH3AQ9Y2J0 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPH3AQ9Y2J0 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RPH3AQ9Y2J0 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RPH3AQ9Y2J0 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPH3AQ9Y2J0 AC034268.1-201ENST00000441047 882 ntBASIC19.49■□□□□ 0.71
RPH3AQ9Y2J0 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RPH3AQ9Y2J0 DUX4L2-201ENST00000561772 1275 ntBASIC19.49■□□□□ 0.71
RPH3AQ9Y2J0 AC022517.1-201ENST00000592429 346 ntBASIC19.49■□□□□ 0.71
RPH3AQ9Y2J0 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.49■□□□□ 0.71
RPH3AQ9Y2J0 DUX4L6-201ENST00000626483 1275 ntBASIC19.49■□□□□ 0.71
RPH3AQ9Y2J0 DUX4L1-201ENST00000627662 1275 ntBASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms