Protein–RNA interactions for Protein: Q9NVP1

DDX18, ATP-dependent RNA helicase DDX18, humanhuman

Known RBP Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX18Q9NVP1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
DDX18Q9NVP1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX18Q9NVP1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX18Q9NVP1 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
DDX18Q9NVP1 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
DDX18Q9NVP1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX18Q9NVP1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX18Q9NVP1 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.56■□□□□ 0.88
DDX18Q9NVP1 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX18Q9NVP1 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.56■□□□□ 0.88
DDX18Q9NVP1 MIR3181-201ENST00000578512 73 ntBASIC20.56■□□□□ 0.88
DDX18Q9NVP1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.56■□□□□ 0.88
DDX18Q9NVP1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.56■□□□□ 0.88
DDX18Q9NVP1 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
DDX18Q9NVP1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX18Q9NVP1 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX18Q9NVP1 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DDX18Q9NVP1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX18Q9NVP1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
DDX18Q9NVP1 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX18Q9NVP1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.56■□□□□ 0.88
DDX18Q9NVP1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
DDX18Q9NVP1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX18Q9NVP1 AC087742.1-201ENST00000575880 1738 ntBASIC20.56■□□□□ 0.88
DDX18Q9NVP1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX18Q9NVP1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX18Q9NVP1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
DDX18Q9NVP1 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX18Q9NVP1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX18Q9NVP1 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX18Q9NVP1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX18Q9NVP1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX18Q9NVP1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
DDX18Q9NVP1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.55■□□□□ 0.88
DDX18Q9NVP1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.55■□□□□ 0.88
DDX18Q9NVP1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX18Q9NVP1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
DDX18Q9NVP1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX18Q9NVP1 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.55■□□□□ 0.88
DDX18Q9NVP1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
DDX18Q9NVP1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
DDX18Q9NVP1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX18Q9NVP1 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX18Q9NVP1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX18Q9NVP1 AL136116.3-201ENST00000402907 1138 ntBASIC20.54■□□□□ 0.88
DDX18Q9NVP1 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.54■□□□□ 0.88
DDX18Q9NVP1 DUX4L19-201ENST00000557448 1267 ntBASIC20.54■□□□□ 0.88
DDX18Q9NVP1 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.54■□□□□ 0.88
DDX18Q9NVP1 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX18Q9NVP1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDX18Q9NVP1 SYT6-210ENST00000641643 1587 ntBASIC20.54■□□□□ 0.88
DDX18Q9NVP1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
DDX18Q9NVP1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.53■□□□□ 0.88
DDX18Q9NVP1 AC007952.6-201ENST00000573168 2673 ntBASIC20.53■□□□□ 0.88
DDX18Q9NVP1 AC003957.1-201ENST00000625108 2673 ntBASIC20.53■□□□□ 0.88
DDX18Q9NVP1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
DDX18Q9NVP1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.53■□□□□ 0.88
DDX18Q9NVP1 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
DDX18Q9NVP1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX18Q9NVP1 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.53■□□□□ 0.88
DDX18Q9NVP1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
DDX18Q9NVP1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.53■□□□□ 0.88
DDX18Q9NVP1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DDX18Q9NVP1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DDX18Q9NVP1 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX18Q9NVP1 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX18Q9NVP1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX18Q9NVP1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDX18Q9NVP1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
DDX18Q9NVP1 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DDX18Q9NVP1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DDX18Q9NVP1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
DDX18Q9NVP1 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
DDX18Q9NVP1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.52■□□□□ 0.88
DDX18Q9NVP1 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
DDX18Q9NVP1 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.52■□□□□ 0.88
DDX18Q9NVP1 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DDX18Q9NVP1 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
DDX18Q9NVP1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
DDX18Q9NVP1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
DDX18Q9NVP1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
DDX18Q9NVP1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.52■□□□□ 0.87
DDX18Q9NVP1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.51■□□□□ 0.87
DDX18Q9NVP1 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DDX18Q9NVP1 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
DDX18Q9NVP1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DDX18Q9NVP1 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX18Q9NVP1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX18Q9NVP1 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX18Q9NVP1 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
DDX18Q9NVP1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX18Q9NVP1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX18Q9NVP1 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDX18Q9NVP1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.51■□□□□ 0.87
DDX18Q9NVP1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.51■□□□□ 0.87
DDX18Q9NVP1 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX18Q9NVP1 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
DDX18Q9NVP1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX18Q9NVP1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDX18Q9NVP1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms