Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
C12orf4Q9NQ89 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
C12orf4Q9NQ89 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
C12orf4Q9NQ89 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
C12orf4Q9NQ89 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
C12orf4Q9NQ89 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
C12orf4Q9NQ89 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
C12orf4Q9NQ89 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
C12orf4Q9NQ89 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
C12orf4Q9NQ89 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.46■□□□□ 0.55
C12orf4Q9NQ89 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.46■□□□□ 0.55
C12orf4Q9NQ89 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.46■□□□□ 0.55
C12orf4Q9NQ89 DUX4L4-201ENST00000566884 1269 ntBASIC18.46■□□□□ 0.55
C12orf4Q9NQ89 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
C12orf4Q9NQ89 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
C12orf4Q9NQ89 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
C12orf4Q9NQ89 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
C12orf4Q9NQ89 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.54
C12orf4Q9NQ89 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
C12orf4Q9NQ89 FBXW4P1-201ENST00000426721 2239 ntBASIC18.45■□□□□ 0.54
C12orf4Q9NQ89 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
C12orf4Q9NQ89 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.45■□□□□ 0.54
C12orf4Q9NQ89 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
C12orf4Q9NQ89 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
C12orf4Q9NQ89 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
C12orf4Q9NQ89 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
C12orf4Q9NQ89 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
C12orf4Q9NQ89 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.45■□□□□ 0.54
C12orf4Q9NQ89 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
C12orf4Q9NQ89 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
C12orf4Q9NQ89 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
C12orf4Q9NQ89 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
C12orf4Q9NQ89 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
C12orf4Q9NQ89 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
C12orf4Q9NQ89 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.44■□□□□ 0.54
C12orf4Q9NQ89 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
C12orf4Q9NQ89 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
C12orf4Q9NQ89 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
C12orf4Q9NQ89 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.44■□□□□ 0.54
C12orf4Q9NQ89 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.44■□□□□ 0.54
C12orf4Q9NQ89 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
C12orf4Q9NQ89 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.44■□□□□ 0.54
C12orf4Q9NQ89 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
C12orf4Q9NQ89 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
C12orf4Q9NQ89 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
C12orf4Q9NQ89 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
C12orf4Q9NQ89 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
C12orf4Q9NQ89 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
C12orf4Q9NQ89 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.44■□□□□ 0.54
C12orf4Q9NQ89 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.44■□□□□ 0.54
C12orf4Q9NQ89 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
C12orf4Q9NQ89 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.43■□□□□ 0.54
C12orf4Q9NQ89 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
C12orf4Q9NQ89 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
C12orf4Q9NQ89 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
C12orf4Q9NQ89 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
C12orf4Q9NQ89 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
C12orf4Q9NQ89 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
C12orf4Q9NQ89 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
C12orf4Q9NQ89 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
C12orf4Q9NQ89 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.43■□□□□ 0.54
C12orf4Q9NQ89 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.43■□□□□ 0.54
C12orf4Q9NQ89 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.43■□□□□ 0.54
C12orf4Q9NQ89 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
C12orf4Q9NQ89 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
C12orf4Q9NQ89 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
C12orf4Q9NQ89 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.43■□□□□ 0.54
C12orf4Q9NQ89 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.43■□□□□ 0.54
C12orf4Q9NQ89 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
C12orf4Q9NQ89 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.42■□□□□ 0.54
C12orf4Q9NQ89 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
C12orf4Q9NQ89 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
C12orf4Q9NQ89 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.42■□□□□ 0.54
C12orf4Q9NQ89 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.42■□□□□ 0.54
C12orf4Q9NQ89 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.42■□□□□ 0.54
C12orf4Q9NQ89 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
C12orf4Q9NQ89 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
C12orf4Q9NQ89 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
C12orf4Q9NQ89 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
C12orf4Q9NQ89 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.42■□□□□ 0.54
C12orf4Q9NQ89 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
C12orf4Q9NQ89 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
C12orf4Q9NQ89 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
C12orf4Q9NQ89 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
C12orf4Q9NQ89 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.42■□□□□ 0.54
C12orf4Q9NQ89 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
C12orf4Q9NQ89 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
C12orf4Q9NQ89 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
C12orf4Q9NQ89 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.41■□□□□ 0.54
C12orf4Q9NQ89 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
C12orf4Q9NQ89 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
C12orf4Q9NQ89 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
C12orf4Q9NQ89 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
C12orf4Q9NQ89 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
C12orf4Q9NQ89 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
C12orf4Q9NQ89 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
C12orf4Q9NQ89 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
C12orf4Q9NQ89 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.41■□□□□ 0.54
C12orf4Q9NQ89 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
C12orf4Q9NQ89 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms