Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMG20AQ9NP66 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMG20AQ9NP66 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMG20AQ9NP66 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMG20AQ9NP66 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.36■□□□□ 0.69
HMG20AQ9NP66 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HMG20AQ9NP66 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
HMG20AQ9NP66 AC131274.2-201ENST00000580697 1507 ntBASIC19.35■□□□□ 0.69
HMG20AQ9NP66 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.35■□□□□ 0.69
HMG20AQ9NP66 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMG20AQ9NP66 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.35■□□□□ 0.69
HMG20AQ9NP66 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMG20AQ9NP66 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
HMG20AQ9NP66 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
HMG20AQ9NP66 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.35■□□□□ 0.69
HMG20AQ9NP66 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.35■□□□□ 0.69
HMG20AQ9NP66 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMG20AQ9NP66 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.35■□□□□ 0.69
HMG20AQ9NP66 THA1P-201ENST00000590384 1145 ntBASIC19.35■□□□□ 0.69
HMG20AQ9NP66 ALDH1A3-203ENST00000557963 1670 ntBASIC19.35■□□□□ 0.69
HMG20AQ9NP66 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HMG20AQ9NP66 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.35■□□□□ 0.69
HMG20AQ9NP66 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMG20AQ9NP66 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMG20AQ9NP66 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HMG20AQ9NP66 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.35■□□□□ 0.69
HMG20AQ9NP66 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HMG20AQ9NP66 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMG20AQ9NP66 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMG20AQ9NP66 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.34■□□□□ 0.69
HMG20AQ9NP66 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMG20AQ9NP66 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HMG20AQ9NP66 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMG20AQ9NP66 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMG20AQ9NP66 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMG20AQ9NP66 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.34■□□□□ 0.69
HMG20AQ9NP66 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HMG20AQ9NP66 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.34■□□□□ 0.69
HMG20AQ9NP66 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.34■□□□□ 0.69
HMG20AQ9NP66 AL033527.3-201ENST00000566366 1196 ntBASIC19.34■□□□□ 0.69
HMG20AQ9NP66 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HMG20AQ9NP66 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.34■□□□□ 0.69
HMG20AQ9NP66 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMG20AQ9NP66 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMG20AQ9NP66 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
HMG20AQ9NP66 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.34■□□□□ 0.69
HMG20AQ9NP66 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
HMG20AQ9NP66 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
HMG20AQ9NP66 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.33■□□□□ 0.69
HMG20AQ9NP66 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HMG20AQ9NP66 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
HMG20AQ9NP66 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.33■□□□□ 0.68
HMG20AQ9NP66 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HMG20AQ9NP66 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.33■□□□□ 0.68
HMG20AQ9NP66 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HMG20AQ9NP66 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.33■□□□□ 0.68
HMG20AQ9NP66 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HMG20AQ9NP66 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
HMG20AQ9NP66 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HMG20AQ9NP66 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HMG20AQ9NP66 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HMG20AQ9NP66 FEM1AP1-201ENST00000431297 1995 ntBASIC19.33■□□□□ 0.68
HMG20AQ9NP66 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.33■□□□□ 0.68
HMG20AQ9NP66 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
HMG20AQ9NP66 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.33■□□□□ 0.68
HMG20AQ9NP66 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
HMG20AQ9NP66 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMG20AQ9NP66 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.32■□□□□ 0.68
HMG20AQ9NP66 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMG20AQ9NP66 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HMG20AQ9NP66 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HMG20AQ9NP66 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMG20AQ9NP66 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.32■□□□□ 0.68
HMG20AQ9NP66 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.32■□□□□ 0.68
HMG20AQ9NP66 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.32■□□□□ 0.68
HMG20AQ9NP66 MIR4281-201ENST00000580852 62 ntBASIC19.32■□□□□ 0.68
HMG20AQ9NP66 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.32■□□□□ 0.68
HMG20AQ9NP66 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMG20AQ9NP66 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.32■□□□□ 0.68
HMG20AQ9NP66 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMG20AQ9NP66 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HMG20AQ9NP66 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMG20AQ9NP66 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMG20AQ9NP66 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMG20AQ9NP66 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMG20AQ9NP66 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
HMG20AQ9NP66 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMG20AQ9NP66 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.31■□□□□ 0.68
HMG20AQ9NP66 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.31■□□□□ 0.68
HMG20AQ9NP66 MIR4508-201ENST00000584178 70 ntBASIC19.31■□□□□ 0.68
HMG20AQ9NP66 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.31■□□□□ 0.68
HMG20AQ9NP66 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.31■□□□□ 0.68
HMG20AQ9NP66 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.31■□□□□ 0.68
HMG20AQ9NP66 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMG20AQ9NP66 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMG20AQ9NP66 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.31■□□□□ 0.68
HMG20AQ9NP66 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.3■□□□□ 0.68
HMG20AQ9NP66 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.3■□□□□ 0.68
HMG20AQ9NP66 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMG20AQ9NP66 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms