Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.56■□□□□ 0.88
LRTM1Q9HBL6 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRTM1Q9HBL6 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
LRTM1Q9HBL6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
LRTM1Q9HBL6 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRTM1Q9HBL6 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRTM1Q9HBL6 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRTM1Q9HBL6 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.55■□□□□ 0.88
LRTM1Q9HBL6 SLC47A1P1-202ENST00000449666 945 ntBASIC20.55■□□□□ 0.88
LRTM1Q9HBL6 AP005435.1-201ENST00000529293 1178 ntBASIC20.55■□□□□ 0.88
LRTM1Q9HBL6 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.55■□□□□ 0.88
LRTM1Q9HBL6 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
LRTM1Q9HBL6 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.55■□□□□ 0.88
LRTM1Q9HBL6 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
LRTM1Q9HBL6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRTM1Q9HBL6 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRTM1Q9HBL6 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRTM1Q9HBL6 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
LRTM1Q9HBL6 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRTM1Q9HBL6 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRTM1Q9HBL6 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRTM1Q9HBL6 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LRTM1Q9HBL6 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LRTM1Q9HBL6 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.54■□□□□ 0.88
LRTM1Q9HBL6 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.54■□□□□ 0.88
LRTM1Q9HBL6 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.54■□□□□ 0.88
LRTM1Q9HBL6 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRTM1Q9HBL6 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRTM1Q9HBL6 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
LRTM1Q9HBL6 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRTM1Q9HBL6 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRTM1Q9HBL6 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.53■□□□□ 0.88
LRTM1Q9HBL6 AC019069.1-201ENST00000610008 1333 ntBASIC20.53■□□□□ 0.88
LRTM1Q9HBL6 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRTM1Q9HBL6 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
LRTM1Q9HBL6 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.53■□□□□ 0.88
LRTM1Q9HBL6 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.53■□□□□ 0.88
LRTM1Q9HBL6 AL034346.1-201ENST00000568244 1277 ntBASIC20.53■□□□□ 0.88
LRTM1Q9HBL6 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.53■□□□□ 0.88
LRTM1Q9HBL6 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.53■□□□□ 0.88
LRTM1Q9HBL6 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
LRTM1Q9HBL6 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
LRTM1Q9HBL6 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LRTM1Q9HBL6 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRTM1Q9HBL6 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.52■□□□□ 0.88
LRTM1Q9HBL6 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRTM1Q9HBL6 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.52■□□□□ 0.88
LRTM1Q9HBL6 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
LRTM1Q9HBL6 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRTM1Q9HBL6 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LRTM1Q9HBL6 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LRTM1Q9HBL6 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRTM1Q9HBL6 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.52■□□□□ 0.88
LRTM1Q9HBL6 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
LRTM1Q9HBL6 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.51■□□□□ 0.87
LRTM1Q9HBL6 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.51■□□□□ 0.87
LRTM1Q9HBL6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRTM1Q9HBL6 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRTM1Q9HBL6 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.51■□□□□ 0.87
LRTM1Q9HBL6 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.51■□□□□ 0.87
LRTM1Q9HBL6 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRTM1Q9HBL6 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRTM1Q9HBL6 FEM1AP4-201ENST00000443167 1987 ntBASIC20.51■□□□□ 0.87
LRTM1Q9HBL6 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.51■□□□□ 0.87
LRTM1Q9HBL6 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRTM1Q9HBL6 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRTM1Q9HBL6 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRTM1Q9HBL6 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRTM1Q9HBL6 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRTM1Q9HBL6 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
LRTM1Q9HBL6 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRTM1Q9HBL6 AC131212.1-201ENST00000613771 668 ntBASIC20.5■□□□□ 0.87
LRTM1Q9HBL6 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.5■□□□□ 0.87
LRTM1Q9HBL6 AP004607.7-201ENST00000527152 1677 ntBASIC20.5■□□□□ 0.87
LRTM1Q9HBL6 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRTM1Q9HBL6 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRTM1Q9HBL6 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.5■□□□□ 0.87
LRTM1Q9HBL6 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
LRTM1Q9HBL6 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRTM1Q9HBL6 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRTM1Q9HBL6 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.5■□□□□ 0.87
LRTM1Q9HBL6 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
LRTM1Q9HBL6 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRTM1Q9HBL6 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRTM1Q9HBL6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.49■□□□□ 0.87
LRTM1Q9HBL6 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRTM1Q9HBL6 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRTM1Q9HBL6 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRTM1Q9HBL6 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.49■□□□□ 0.87
LRTM1Q9HBL6 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.49■□□□□ 0.87
LRTM1Q9HBL6 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRTM1Q9HBL6 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRTM1Q9HBL6 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.49■□□□□ 0.87
LRTM1Q9HBL6 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRTM1Q9HBL6 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRTM1Q9HBL6 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRTM1Q9HBL6 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRTM1Q9HBL6 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
LRTM1Q9HBL6 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.49■□□□□ 0.87
LRTM1Q9HBL6 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms