Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.04■■□□□ 1.28
CDH23Q9H251 MIR718-201ENST00000390190 70 ntBASIC23.04■■□□□ 1.28
CDH23Q9H251 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDH23Q9H251 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC23.03■■□□□ 1.28
CDH23Q9H251 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CDH23Q9H251 SNORA78-201ENST00000459373 127 ntBASIC23.03■■□□□ 1.28
CDH23Q9H251 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CDH23Q9H251 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC23.03■■□□□ 1.28
CDH23Q9H251 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC23.03■■□□□ 1.28
CDH23Q9H251 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CDH23Q9H251 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDH23Q9H251 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDH23Q9H251 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDH23Q9H251 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
CDH23Q9H251 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC23.02■■□□□ 1.28
CDH23Q9H251 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
CDH23Q9H251 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDH23Q9H251 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDH23Q9H251 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CDH23Q9H251 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CDH23Q9H251 BMP1-204ENST00000397814 836 ntTSL 4 BASIC23.02■■□□□ 1.28
CDH23Q9H251 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC23.02■■□□□ 1.28
CDH23Q9H251 OR10C1-204ENST00000622521 1039 ntBASIC23.02■■□□□ 1.28
CDH23Q9H251 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDH23Q9H251 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDH23Q9H251 ISCU-212ENST00000547005 795 ntTSL 3 BASIC23.01■■□□□ 1.27
CDH23Q9H251 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDH23Q9H251 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDH23Q9H251 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDH23Q9H251 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDH23Q9H251 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
CDH23Q9H251 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
CDH23Q9H251 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDH23Q9H251 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC23.01■■□□□ 1.27
CDH23Q9H251 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
CDH23Q9H251 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC23■■□□□ 1.27
CDH23Q9H251 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23■■□□□ 1.27
CDH23Q9H251 AC010141.3-201ENST00000456659 717 ntBASIC23■■□□□ 1.27
CDH23Q9H251 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC23■■□□□ 1.27
CDH23Q9H251 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC23■■□□□ 1.27
CDH23Q9H251 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CDH23Q9H251 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
CDH23Q9H251 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
CDH23Q9H251 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC23■■□□□ 1.27
CDH23Q9H251 AL512625.2-201ENST00000417533 625 ntBASIC23■■□□□ 1.27
CDH23Q9H251 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC23■■□□□ 1.27
CDH23Q9H251 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CDH23Q9H251 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23■■□□□ 1.27
CDH23Q9H251 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC23■■□□□ 1.27
CDH23Q9H251 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC23■■□□□ 1.27
CDH23Q9H251 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC23■■□□□ 1.27
CDH23Q9H251 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC23■■□□□ 1.27
CDH23Q9H251 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23■■□□□ 1.27
CDH23Q9H251 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CDH23Q9H251 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
CDH23Q9H251 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CDH23Q9H251 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CDH23Q9H251 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.99■■□□□ 1.27
CDH23Q9H251 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CDH23Q9H251 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC22.99■■□□□ 1.27
CDH23Q9H251 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
CDH23Q9H251 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
CDH23Q9H251 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
CDH23Q9H251 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
CDH23Q9H251 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDH23Q9H251 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC22.98■■□□□ 1.27
CDH23Q9H251 AC016405.3-201ENST00000607710 860 ntBASIC22.98■■□□□ 1.27
CDH23Q9H251 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
CDH23Q9H251 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDH23Q9H251 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC22.98■■□□□ 1.27
CDH23Q9H251 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC22.98■■□□□ 1.27
CDH23Q9H251 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC22.98■■□□□ 1.27
CDH23Q9H251 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDH23Q9H251 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
CDH23Q9H251 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDH23Q9H251 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC22.98■■□□□ 1.27
CDH23Q9H251 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDH23Q9H251 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CDH23Q9H251 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC22.97■■□□□ 1.27
CDH23Q9H251 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC22.97■■□□□ 1.27
CDH23Q9H251 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.97■■□□□ 1.27
CDH23Q9H251 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
CDH23Q9H251 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.97■■□□□ 1.27
CDH23Q9H251 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
CDH23Q9H251 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC22.97■■□□□ 1.27
CDH23Q9H251 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC22.97■■□□□ 1.27
CDH23Q9H251 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC22.97■■□□□ 1.27
CDH23Q9H251 Z99916.2-201ENST00000604037 246 ntBASIC22.97■■□□□ 1.27
CDH23Q9H251 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC22.97■■□□□ 1.27
CDH23Q9H251 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CDH23Q9H251 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
CDH23Q9H251 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CDH23Q9H251 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC22.96■■□□□ 1.27
CDH23Q9H251 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CDH23Q9H251 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
CDH23Q9H251 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CDH23Q9H251 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
CDH23Q9H251 PPOX-219ENST00000544598 813 ntTSL 2 BASIC22.96■■□□□ 1.27
CDH23Q9H251 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CDH23Q9H251 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms