Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 APOBEC3H-204ENST00000442487 988 ntAPPRIS P3 TSL 3 BASIC13.1□□□□□ -0.31
KRTAP3-3Q9BYR6 ELOCP13-201ENST00000443934 329 ntBASIC13.1□□□□□ -0.31
KRTAP3-3Q9BYR6 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC13.1□□□□□ -0.31
KRTAP3-3Q9BYR6 AL359385.1-201ENST00000456509 365 ntBASIC13.1□□□□□ -0.31
KRTAP3-3Q9BYR6 NPSR1-208ENST00000465305 814 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
KRTAP3-3Q9BYR6 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC13.1□□□□□ -0.31
KRTAP3-3Q9BYR6 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC13.1□□□□□ -0.31
KRTAP3-3Q9BYR6 AC109927.2-201ENST00000506416 303 ntBASIC13.1□□□□□ -0.31
KRTAP3-3Q9BYR6 SETP3-201ENST00000581726 813 ntBASIC13.1□□□□□ -0.31
KRTAP3-3Q9BYR6 OR1AB1P-201ENST00000585564 761 ntBASIC13.1□□□□□ -0.31
KRTAP3-3Q9BYR6 AC008751.2-201ENST00000597885 980 ntBASIC13.1□□□□□ -0.31
KRTAP3-3Q9BYR6 NIFKP6-201ENST00000598115 845 ntBASIC13.1□□□□□ -0.31
KRTAP3-3Q9BYR6 AL031258.1-201ENST00000623562 325 ntBASIC13.1□□□□□ -0.31
KRTAP3-3Q9BYR6 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
KRTAP3-3Q9BYR6 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
KRTAP3-3Q9BYR6 ACBD7-201ENST00000356189 1322 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
KRTAP3-3Q9BYR6 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC13.09□□□□□ -0.31
KRTAP3-3Q9BYR6 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
KRTAP3-3Q9BYR6 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
KRTAP3-3Q9BYR6 AL049697.3-201ENST00000406493 982 ntBASIC13.09□□□□□ -0.31
KRTAP3-3Q9BYR6 FGF1-206ENST00000407758 759 ntTSL 5 BASIC13.09□□□□□ -0.31
KRTAP3-3Q9BYR6 AC005550.1-201ENST00000438923 312 ntTSL 2 BASIC13.09□□□□□ -0.31
KRTAP3-3Q9BYR6 OR6C72P-201ENST00000451403 892 ntBASIC13.09□□□□□ -0.31
KRTAP3-3Q9BYR6 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC13.09□□□□□ -0.31
KRTAP3-3Q9BYR6 AC096992.1-201ENST00000459808 709 ntBASIC13.09□□□□□ -0.31
KRTAP3-3Q9BYR6 TRAV31-201ENST00000502780 342 ntBASIC13.09□□□□□ -0.31
KRTAP3-3Q9BYR6 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC13.09□□□□□ -0.31
KRTAP3-3Q9BYR6 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC13.09□□□□□ -0.31
KRTAP3-3Q9BYR6 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC13.09□□□□□ -0.31
KRTAP3-3Q9BYR6 AC022022.2-201ENST00000602989 360 ntBASIC13.09□□□□□ -0.31
KRTAP3-3Q9BYR6 OR4K14-202ENST00000641793 1245 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
KRTAP3-3Q9BYR6 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.09□□□□□ -0.31
KRTAP3-3Q9BYR6 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
KRTAP3-3Q9BYR6 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
KRTAP3-3Q9BYR6 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
KRTAP3-3Q9BYR6 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
KRTAP3-3Q9BYR6 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
KRTAP3-3Q9BYR6 LINC00159-202ENST00000414877 428 ntTSL 4 BASIC13.08□□□□□ -0.32
KRTAP3-3Q9BYR6 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC13.08□□□□□ -0.32
KRTAP3-3Q9BYR6 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
KRTAP3-3Q9BYR6 MTND5P13-201ENST00000513046 1079 ntBASIC13.08□□□□□ -0.32
KRTAP3-3Q9BYR6 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC13.08□□□□□ -0.32
KRTAP3-3Q9BYR6 AC034244.2-201ENST00000514668 858 ntBASIC13.08□□□□□ -0.32
KRTAP3-3Q9BYR6 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC13.08□□□□□ -0.32
KRTAP3-3Q9BYR6 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC13.08□□□□□ -0.32
KRTAP3-3Q9BYR6 AL133499.1-201ENST00000596207 608 ntBASIC13.08□□□□□ -0.32
KRTAP3-3Q9BYR6 AC132216.1-201ENST00000610375 1158 ntBASIC13.08□□□□□ -0.32
KRTAP3-3Q9BYR6 LINC01358-209ENST00000635072 1114 ntTSL 5 BASIC13.08□□□□□ -0.32
KRTAP3-3Q9BYR6 AC132825.7-201ENST00000638744 335 ntBASIC13.08□□□□□ -0.32
KRTAP3-3Q9BYR6 AC099654.10-201ENST00000640395 161 ntBASIC13.08□□□□□ -0.32
KRTAP3-3Q9BYR6 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
KRTAP3-3Q9BYR6 LINC02006-202ENST00000492569 1958 ntTSL 2 BASIC13.08□□□□□ -0.32
KRTAP3-3Q9BYR6 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC13.08□□□□□ -0.32
KRTAP3-3Q9BYR6 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
KRTAP3-3Q9BYR6 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
KRTAP3-3Q9BYR6 PSMC1P11-201ENST00000405257 1317 ntBASIC13.08□□□□□ -0.32
KRTAP3-3Q9BYR6 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
KRTAP3-3Q9BYR6 CCT6P3-203ENST00000452026 1383 ntBASIC13.07□□□□□ -0.32
KRTAP3-3Q9BYR6 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.07□□□□□ -0.32
KRTAP3-3Q9BYR6 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.07□□□□□ -0.32
KRTAP3-3Q9BYR6 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC13.07□□□□□ -0.32
KRTAP3-3Q9BYR6 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
KRTAP3-3Q9BYR6 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC13.07□□□□□ -0.32
KRTAP3-3Q9BYR6 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC13.07□□□□□ -0.32
KRTAP3-3Q9BYR6 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC13.07□□□□□ -0.32
KRTAP3-3Q9BYR6 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC13.07□□□□□ -0.32
KRTAP3-3Q9BYR6 AL049651.1-201ENST00000440798 719 ntTSL 5 BASIC13.07□□□□□ -0.32
KRTAP3-3Q9BYR6 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC13.07□□□□□ -0.32
KRTAP3-3Q9BYR6 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC13.07□□□□□ -0.32
KRTAP3-3Q9BYR6 FDX1P2-201ENST00000450769 375 ntBASIC13.07□□□□□ -0.32
KRTAP3-3Q9BYR6 RPL12P33-201ENST00000485633 492 ntBASIC13.07□□□□□ -0.32
KRTAP3-3Q9BYR6 AC092910.2-201ENST00000491262 348 ntBASIC13.07□□□□□ -0.32
KRTAP3-3Q9BYR6 QTRT2-215ENST00000493014 1046 ntTSL 2 BASIC13.07□□□□□ -0.32
KRTAP3-3Q9BYR6 AC092535.2-201ENST00000513176 1204 ntBASIC13.07□□□□□ -0.32
KRTAP3-3Q9BYR6 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.07□□□□□ -0.32
KRTAP3-3Q9BYR6 AC023161.2-201ENST00000551218 780 ntBASIC13.07□□□□□ -0.32
KRTAP3-3Q9BYR6 AL162171.2-201ENST00000555444 905 ntTSL 3 BASIC13.07□□□□□ -0.32
KRTAP3-3Q9BYR6 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC13.07□□□□□ -0.32
KRTAP3-3Q9BYR6 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC13.07□□□□□ -0.32
KRTAP3-3Q9BYR6 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC13.07□□□□□ -0.32
KRTAP3-3Q9BYR6 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC13.07□□□□□ -0.32
KRTAP3-3Q9BYR6 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC13.07□□□□□ -0.32
KRTAP3-3Q9BYR6 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC13.07□□□□□ -0.32
KRTAP3-3Q9BYR6 AC034236.3-201ENST00000605999 461 ntBASIC13.07□□□□□ -0.32
KRTAP3-3Q9BYR6 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC13.07□□□□□ -0.32
KRTAP3-3Q9BYR6 AC012645.4-201ENST00000610691 1061 ntBASIC13.07□□□□□ -0.32
KRTAP3-3Q9BYR6 AC092159.4-201ENST00000624944 550 ntBASIC13.07□□□□□ -0.32
KRTAP3-3Q9BYR6 ASAH1-229ENST00000636537 1056 ntTSL 2 BASIC13.07□□□□□ -0.32
KRTAP3-3Q9BYR6 LINC02211-204ENST00000642024 1070 ntBASIC13.07□□□□□ -0.32
KRTAP3-3Q9BYR6 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
KRTAP3-3Q9BYR6 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
KRTAP3-3Q9BYR6 AL136520.1-201ENST00000600311 1322 ntBASIC13.07□□□□□ -0.32
KRTAP3-3Q9BYR6 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
KRTAP3-3Q9BYR6 CASC19-248ENST00000641674 1356 ntBASIC13.07□□□□□ -0.32
KRTAP3-3Q9BYR6 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
KRTAP3-3Q9BYR6 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
KRTAP3-3Q9BYR6 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
KRTAP3-3Q9BYR6 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
KRTAP3-3Q9BYR6 BLNK-204ENST00000427367 1284 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
KRTAP3-3Q9BYR6 MTND1P20-201ENST00000430341 950 ntBASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms