Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VRK1Q99986 ESRRAP2-201ENST00000418437 1549 ntBASIC18.77■□□□□ 0.6
VRK1Q99986 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.77■□□□□ 0.6
VRK1Q99986 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
VRK1Q99986 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
VRK1Q99986 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
VRK1Q99986 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
VRK1Q99986 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
VRK1Q99986 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
VRK1Q99986 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.77■□□□□ 0.59
VRK1Q99986 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
VRK1Q99986 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VRK1Q99986 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.76■□□□□ 0.59
VRK1Q99986 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
VRK1Q99986 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VRK1Q99986 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.76■□□□□ 0.59
VRK1Q99986 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VRK1Q99986 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.76■□□□□ 0.59
VRK1Q99986 AP005435.1-201ENST00000529293 1178 ntBASIC18.76■□□□□ 0.59
VRK1Q99986 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.76■□□□□ 0.59
VRK1Q99986 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.76■□□□□ 0.59
VRK1Q99986 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.76■□□□□ 0.59
VRK1Q99986 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VRK1Q99986 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VRK1Q99986 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
VRK1Q99986 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VRK1Q99986 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VRK1Q99986 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
VRK1Q99986 AC242852.2-201ENST00000615738 1807 ntBASIC18.76■□□□□ 0.59
VRK1Q99986 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VRK1Q99986 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
VRK1Q99986 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
VRK1Q99986 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
VRK1Q99986 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
VRK1Q99986 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.75■□□□□ 0.59
VRK1Q99986 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
VRK1Q99986 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
VRK1Q99986 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.75■□□□□ 0.59
VRK1Q99986 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VRK1Q99986 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.75■□□□□ 0.59
VRK1Q99986 AL162430.1-201ENST00000480705 870 ntBASIC18.75■□□□□ 0.59
VRK1Q99986 AC012414.1-201ENST00000556676 535 ntBASIC18.75■□□□□ 0.59
VRK1Q99986 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.75■□□□□ 0.59
VRK1Q99986 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
VRK1Q99986 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.75■□□□□ 0.59
VRK1Q99986 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
VRK1Q99986 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.74■□□□□ 0.59
VRK1Q99986 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VRK1Q99986 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
VRK1Q99986 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.74■□□□□ 0.59
VRK1Q99986 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
VRK1Q99986 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VRK1Q99986 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.74■□□□□ 0.59
VRK1Q99986 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.74■□□□□ 0.59
VRK1Q99986 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VRK1Q99986 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
VRK1Q99986 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.74■□□□□ 0.59
VRK1Q99986 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.74■□□□□ 0.59
VRK1Q99986 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VRK1Q99986 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.74■□□□□ 0.59
VRK1Q99986 AL354811.1-201ENST00000610286 706 ntBASIC18.74■□□□□ 0.59
VRK1Q99986 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VRK1Q99986 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.74■□□□□ 0.59
VRK1Q99986 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VRK1Q99986 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
VRK1Q99986 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VRK1Q99986 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VRK1Q99986 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.74■□□□□ 0.59
VRK1Q99986 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VRK1Q99986 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VRK1Q99986 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VRK1Q99986 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VRK1Q99986 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
VRK1Q99986 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.73■□□□□ 0.59
VRK1Q99986 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VRK1Q99986 YBX1P1-201ENST00000445822 960 ntBASIC18.73■□□□□ 0.59
VRK1Q99986 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.73■□□□□ 0.59
VRK1Q99986 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.73■□□□□ 0.59
VRK1Q99986 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
VRK1Q99986 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
VRK1Q99986 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
VRK1Q99986 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
VRK1Q99986 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
VRK1Q99986 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
VRK1Q99986 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.72■□□□□ 0.59
VRK1Q99986 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
VRK1Q99986 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.72■□□□□ 0.59
VRK1Q99986 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.72■□□□□ 0.59
VRK1Q99986 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VRK1Q99986 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
VRK1Q99986 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
VRK1Q99986 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
VRK1Q99986 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.72■□□□□ 0.59
VRK1Q99986 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
VRK1Q99986 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.72■□□□□ 0.59
VRK1Q99986 AC034268.1-201ENST00000441047 882 ntBASIC18.72■□□□□ 0.59
VRK1Q99986 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
VRK1Q99986 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VRK1Q99986 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
VRK1Q99986 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms