Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC31■■■□□ 2.55
SCAF11Q99590 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC31■■■□□ 2.55
SCAF11Q99590 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC31■■■□□ 2.55
SCAF11Q99590 ESRRAP1-201ENST00000400596 1257 ntBASIC31■■■□□ 2.55
SCAF11Q99590 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC31■■■□□ 2.55
SCAF11Q99590 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC31■■■□□ 2.55
SCAF11Q99590 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
SCAF11Q99590 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
SCAF11Q99590 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC30.99■■■□□ 2.55
SCAF11Q99590 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC30.99■■■□□ 2.55
SCAF11Q99590 TERF1P5-201ENST00000477545 1207 ntBASIC30.99■■■□□ 2.55
SCAF11Q99590 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC30.99■■■□□ 2.55
SCAF11Q99590 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC30.99■■■□□ 2.55
SCAF11Q99590 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
SCAF11Q99590 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC30.99■■■□□ 2.55
SCAF11Q99590 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
SCAF11Q99590 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SCAF11Q99590 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SCAF11Q99590 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC30.98■■■□□ 2.55
SCAF11Q99590 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC30.98■■■□□ 2.55
SCAF11Q99590 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC30.98■■■□□ 2.55
SCAF11Q99590 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC30.98■■■□□ 2.55
SCAF11Q99590 PLLP-204ENST00000569059 665 ntTSL 3 BASIC30.98■■■□□ 2.55
SCAF11Q99590 AC016405.3-201ENST00000607710 860 ntBASIC30.98■■■□□ 2.55
SCAF11Q99590 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC30.98■■■□□ 2.55
SCAF11Q99590 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC30.98■■■□□ 2.55
SCAF11Q99590 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC30.98■■■□□ 2.55
SCAF11Q99590 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
SCAF11Q99590 BMP1-204ENST00000397814 836 ntTSL 4 BASIC30.97■■■□□ 2.55
SCAF11Q99590 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
SCAF11Q99590 RHEB-204ENST00000472642 900 ntTSL 3 BASIC30.97■■■□□ 2.55
SCAF11Q99590 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
SCAF11Q99590 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
SCAF11Q99590 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC30.97■■■□□ 2.55
SCAF11Q99590 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
SCAF11Q99590 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC30.97■■■□□ 2.55
SCAF11Q99590 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
SCAF11Q99590 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
SCAF11Q99590 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC30.96■■■□□ 2.55
SCAF11Q99590 GAS7-202ENST00000396115 929 ntTSL 5 BASIC30.96■■■□□ 2.55
SCAF11Q99590 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC30.96■■■□□ 2.55
SCAF11Q99590 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC30.96■■■□□ 2.55
SCAF11Q99590 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
SCAF11Q99590 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC30.95■■■□□ 2.55
SCAF11Q99590 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
SCAF11Q99590 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC30.95■■■□□ 2.55
SCAF11Q99590 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
SCAF11Q99590 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC30.95■■■□□ 2.55
SCAF11Q99590 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC30.95■■■□□ 2.55
SCAF11Q99590 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
SCAF11Q99590 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
SCAF11Q99590 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
SCAF11Q99590 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC30.95■■■□□ 2.54
SCAF11Q99590 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.54
SCAF11Q99590 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC30.95■■■□□ 2.54
SCAF11Q99590 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC30.95■■■□□ 2.54
SCAF11Q99590 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC30.95■■■□□ 2.54
SCAF11Q99590 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC30.95■■■□□ 2.54
SCAF11Q99590 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
SCAF11Q99590 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
SCAF11Q99590 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC30.94■■■□□ 2.54
SCAF11Q99590 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC30.94■■■□□ 2.54
SCAF11Q99590 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
SCAF11Q99590 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC30.94■■■□□ 2.54
SCAF11Q99590 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC30.94■■■□□ 2.54
SCAF11Q99590 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
SCAF11Q99590 AL158047.1-201ENST00000445918 881 ntBASIC30.94■■■□□ 2.54
SCAF11Q99590 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC30.94■■■□□ 2.54
SCAF11Q99590 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC30.94■■■□□ 2.54
SCAF11Q99590 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
SCAF11Q99590 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC30.94■■■□□ 2.54
SCAF11Q99590 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC30.94■■■□□ 2.54
SCAF11Q99590 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC30.94■■■□□ 2.54
SCAF11Q99590 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
SCAF11Q99590 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
SCAF11Q99590 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
SCAF11Q99590 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
SCAF11Q99590 AL512625.2-201ENST00000417533 625 ntBASIC30.93■■■□□ 2.54
SCAF11Q99590 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
SCAF11Q99590 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC30.93■■■□□ 2.54
SCAF11Q99590 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC30.93■■■□□ 2.54
SCAF11Q99590 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC30.93■■■□□ 2.54
SCAF11Q99590 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC30.93■■■□□ 2.54
SCAF11Q99590 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC30.92■■■□□ 2.54
SCAF11Q99590 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC30.92■■■□□ 2.54
SCAF11Q99590 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC30.92■■■□□ 2.54
SCAF11Q99590 BAALC-201ENST00000297574 801 ntTSL 3 BASIC30.92■■■□□ 2.54
SCAF11Q99590 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
SCAF11Q99590 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC30.92■■■□□ 2.54
SCAF11Q99590 RPS2P4-201ENST00000476944 856 ntBASIC30.92■■■□□ 2.54
SCAF11Q99590 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC30.92■■■□□ 2.54
SCAF11Q99590 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC30.92■■■□□ 2.54
SCAF11Q99590 AC006058.3-201ENST00000606217 1069 ntBASIC30.92■■■□□ 2.54
SCAF11Q99590 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC30.92■■■□□ 2.54
SCAF11Q99590 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
SCAF11Q99590 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
SCAF11Q99590 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
SCAF11Q99590 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC30.91■■■□□ 2.54
SCAF11Q99590 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC30.91■■■□□ 2.54
SCAF11Q99590 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC30.91■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms