Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AP005435.1-201ENST00000529293 1178 ntBASIC20.17■□□□□ 0.82
COL21A1Q96P44 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.17■□□□□ 0.82
COL21A1Q96P44 AC126544.1-201ENST00000580842 1059 ntBASIC20.17■□□□□ 0.82
COL21A1Q96P44 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL21A1Q96P44 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL21A1Q96P44 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL21A1Q96P44 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL21A1Q96P44 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL21A1Q96P44 RASA4CP-201ENST00000424092 1398 ntBASIC20.17■□□□□ 0.82
COL21A1Q96P44 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL21A1Q96P44 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL21A1Q96P44 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL21A1Q96P44 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL21A1Q96P44 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.17■□□□□ 0.82
COL21A1Q96P44 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL21A1Q96P44 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL21A1Q96P44 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL21A1Q96P44 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL21A1Q96P44 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL21A1Q96P44 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
COL21A1Q96P44 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL21A1Q96P44 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL21A1Q96P44 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL21A1Q96P44 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL21A1Q96P44 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
COL21A1Q96P44 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
COL21A1Q96P44 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.16■□□□□ 0.82
COL21A1Q96P44 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.16■□□□□ 0.82
COL21A1Q96P44 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL21A1Q96P44 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.16■□□□□ 0.82
COL21A1Q96P44 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL21A1Q96P44 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL21A1Q96P44 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
COL21A1Q96P44 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
COL21A1Q96P44 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.16■□□□□ 0.82
COL21A1Q96P44 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL21A1Q96P44 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL21A1Q96P44 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL21A1Q96P44 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL21A1Q96P44 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
COL21A1Q96P44 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL21A1Q96P44 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL21A1Q96P44 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL21A1Q96P44 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
COL21A1Q96P44 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL21A1Q96P44 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.15■□□□□ 0.82
COL21A1Q96P44 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.15■□□□□ 0.82
COL21A1Q96P44 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
COL21A1Q96P44 FAM99A-202ENST00000538190 1989 ntBASIC20.14■□□□□ 0.81
COL21A1Q96P44 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COL21A1Q96P44 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COL21A1Q96P44 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL21A1Q96P44 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
COL21A1Q96P44 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COL21A1Q96P44 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL21A1Q96P44 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.14■□□□□ 0.81
COL21A1Q96P44 AC087239.1-201ENST00000622671 572 ntBASIC20.14■□□□□ 0.81
COL21A1Q96P44 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL21A1Q96P44 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COL21A1Q96P44 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
COL21A1Q96P44 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL21A1Q96P44 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL21A1Q96P44 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
COL21A1Q96P44 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
COL21A1Q96P44 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.13■□□□□ 0.81
COL21A1Q96P44 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.13■□□□□ 0.81
COL21A1Q96P44 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL21A1Q96P44 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL21A1Q96P44 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
COL21A1Q96P44 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.13■□□□□ 0.81
COL21A1Q96P44 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL21A1Q96P44 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.13■□□□□ 0.81
COL21A1Q96P44 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
COL21A1Q96P44 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL21A1Q96P44 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
COL21A1Q96P44 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL21A1Q96P44 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.12■□□□□ 0.81
COL21A1Q96P44 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.12■□□□□ 0.81
COL21A1Q96P44 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL21A1Q96P44 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
COL21A1Q96P44 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.12■□□□□ 0.81
COL21A1Q96P44 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL21A1Q96P44 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL21A1Q96P44 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.12■□□□□ 0.81
COL21A1Q96P44 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL21A1Q96P44 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL21A1Q96P44 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL21A1Q96P44 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL21A1Q96P44 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL21A1Q96P44 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL21A1Q96P44 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
COL21A1Q96P44 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL21A1Q96P44 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL21A1Q96P44 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL21A1Q96P44 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.11■□□□□ 0.81
COL21A1Q96P44 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.11■□□□□ 0.81
COL21A1Q96P44 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL21A1Q96P44 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL21A1Q96P44 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
COL21A1Q96P44 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms