Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RITA1Q96K30 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RITA1Q96K30 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RITA1Q96K30 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RITA1Q96K30 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RITA1Q96K30 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RITA1Q96K30 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
RITA1Q96K30 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RITA1Q96K30 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RITA1Q96K30 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RITA1Q96K30 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RITA1Q96K30 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RITA1Q96K30 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RITA1Q96K30 MIR572-201ENST00000384983 95 ntBASIC17.21■□□□□ 0.35
RITA1Q96K30 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RITA1Q96K30 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.21■□□□□ 0.35
RITA1Q96K30 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
RITA1Q96K30 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RITA1Q96K30 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RITA1Q96K30 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.21■□□□□ 0.35
RITA1Q96K30 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.21■□□□□ 0.34
RITA1Q96K30 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RITA1Q96K30 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RITA1Q96K30 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RITA1Q96K30 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RITA1Q96K30 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RITA1Q96K30 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RITA1Q96K30 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RITA1Q96K30 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RITA1Q96K30 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RITA1Q96K30 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RITA1Q96K30 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
RITA1Q96K30 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RITA1Q96K30 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.2■□□□□ 0.34
RITA1Q96K30 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.2■□□□□ 0.34
RITA1Q96K30 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.2■□□□□ 0.34
RITA1Q96K30 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.2■□□□□ 0.34
RITA1Q96K30 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RITA1Q96K30 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RITA1Q96K30 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RITA1Q96K30 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RITA1Q96K30 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.19■□□□□ 0.34
RITA1Q96K30 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RITA1Q96K30 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RITA1Q96K30 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.19■□□□□ 0.34
RITA1Q96K30 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.19■□□□□ 0.34
RITA1Q96K30 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RITA1Q96K30 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.19■□□□□ 0.34
RITA1Q96K30 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
RITA1Q96K30 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.19■□□□□ 0.34
RITA1Q96K30 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RITA1Q96K30 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RITA1Q96K30 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.19■□□□□ 0.34
RITA1Q96K30 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.19■□□□□ 0.34
RITA1Q96K30 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.19■□□□□ 0.34
RITA1Q96K30 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RITA1Q96K30 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RITA1Q96K30 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.18■□□□□ 0.34
RITA1Q96K30 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RITA1Q96K30 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.18■□□□□ 0.34
RITA1Q96K30 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
RITA1Q96K30 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RITA1Q96K30 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.18■□□□□ 0.34
RITA1Q96K30 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RITA1Q96K30 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RITA1Q96K30 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RITA1Q96K30 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RITA1Q96K30 AC105265.2-201ENST00000467189 838 ntBASIC17.18■□□□□ 0.34
RITA1Q96K30 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.18■□□□□ 0.34
RITA1Q96K30 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.18■□□□□ 0.34
RITA1Q96K30 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RITA1Q96K30 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RITA1Q96K30 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
RITA1Q96K30 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RITA1Q96K30 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.18■□□□□ 0.34
RITA1Q96K30 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RITA1Q96K30 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.17■□□□□ 0.34
RITA1Q96K30 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RITA1Q96K30 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RITA1Q96K30 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.17■□□□□ 0.34
RITA1Q96K30 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
RITA1Q96K30 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RITA1Q96K30 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.17■□□□□ 0.34
RITA1Q96K30 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RITA1Q96K30 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.17■□□□□ 0.34
RITA1Q96K30 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RITA1Q96K30 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RITA1Q96K30 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RITA1Q96K30 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RITA1Q96K30 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.17■□□□□ 0.34
RITA1Q96K30 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RITA1Q96K30 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
RITA1Q96K30 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RITA1Q96K30 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RITA1Q96K30 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RITA1Q96K30 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RITA1Q96K30 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RITA1Q96K30 AC003102.1-202ENST00000563394 1796 ntBASIC17.16■□□□□ 0.34
RITA1Q96K30 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
RITA1Q96K30 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms