Protein–RNA interactions for Protein: Q96CW5

TUBGCP3, Gamma-tubulin complex component 3, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3Q96CW5 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TUBGCP3Q96CW5 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TUBGCP3Q96CW5 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.74■□□□□ 0.91
TUBGCP3Q96CW5 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TUBGCP3Q96CW5 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TUBGCP3Q96CW5 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
TUBGCP3Q96CW5 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
TUBGCP3Q96CW5 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
TUBGCP3Q96CW5 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.73■□□□□ 0.91
TUBGCP3Q96CW5 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TUBGCP3Q96CW5 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TUBGCP3Q96CW5 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TUBGCP3Q96CW5 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TUBGCP3Q96CW5 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.73■□□□□ 0.91
TUBGCP3Q96CW5 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TUBGCP3Q96CW5 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.73■□□□□ 0.91
TUBGCP3Q96CW5 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TUBGCP3Q96CW5 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TUBGCP3Q96CW5 AL356740.2-201ENST00000601559 647 ntBASIC20.73■□□□□ 0.91
TUBGCP3Q96CW5 AC068587.7-201ENST00000641602 218 ntBASIC20.73■□□□□ 0.91
TUBGCP3Q96CW5 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TUBGCP3Q96CW5 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.73■□□□□ 0.91
TUBGCP3Q96CW5 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.73■□□□□ 0.91
TUBGCP3Q96CW5 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TUBGCP3Q96CW5 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TUBGCP3Q96CW5 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TUBGCP3Q96CW5 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TUBGCP3Q96CW5 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TUBGCP3Q96CW5 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TUBGCP3Q96CW5 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.72■□□□□ 0.91
TUBGCP3Q96CW5 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TUBGCP3Q96CW5 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
TUBGCP3Q96CW5 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.72■□□□□ 0.91
TUBGCP3Q96CW5 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
TUBGCP3Q96CW5 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TUBGCP3Q96CW5 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.72■□□□□ 0.91
TUBGCP3Q96CW5 AC104564.3-201ENST00000582367 638 ntBASIC20.72■□□□□ 0.91
TUBGCP3Q96CW5 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
TUBGCP3Q96CW5 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TUBGCP3Q96CW5 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TUBGCP3Q96CW5 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.72■□□□□ 0.91
TUBGCP3Q96CW5 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
TUBGCP3Q96CW5 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
TUBGCP3Q96CW5 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.72■□□□□ 0.91
TUBGCP3Q96CW5 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
TUBGCP3Q96CW5 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.71■□□□□ 0.91
TUBGCP3Q96CW5 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TUBGCP3Q96CW5 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
TUBGCP3Q96CW5 MIR3181-201ENST00000578512 73 ntBASIC20.71■□□□□ 0.91
TUBGCP3Q96CW5 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.71■□□□□ 0.91
TUBGCP3Q96CW5 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TUBGCP3Q96CW5 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TUBGCP3Q96CW5 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.71■□□□□ 0.91
TUBGCP3Q96CW5 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
TUBGCP3Q96CW5 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.71■□□□□ 0.91
TUBGCP3Q96CW5 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TUBGCP3Q96CW5 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TUBGCP3Q96CW5 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.7■□□□□ 0.91
TUBGCP3Q96CW5 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
TUBGCP3Q96CW5 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TUBGCP3Q96CW5 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TUBGCP3Q96CW5 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TUBGCP3Q96CW5 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TUBGCP3Q96CW5 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
TUBGCP3Q96CW5 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.7■□□□□ 0.9
TUBGCP3Q96CW5 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.7■□□□□ 0.9
TUBGCP3Q96CW5 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.7■□□□□ 0.9
TUBGCP3Q96CW5 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
TUBGCP3Q96CW5 AC087239.1-201ENST00000622671 572 ntBASIC20.7■□□□□ 0.9
TUBGCP3Q96CW5 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.7■□□□□ 0.9
TUBGCP3Q96CW5 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
TUBGCP3Q96CW5 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TUBGCP3Q96CW5 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.7■□□□□ 0.9
TUBGCP3Q96CW5 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.7■□□□□ 0.9
TUBGCP3Q96CW5 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.69■□□□□ 0.9
TUBGCP3Q96CW5 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TUBGCP3Q96CW5 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TUBGCP3Q96CW5 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TUBGCP3Q96CW5 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.69■□□□□ 0.9
TUBGCP3Q96CW5 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TUBGCP3Q96CW5 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.69■□□□□ 0.9
TUBGCP3Q96CW5 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TUBGCP3Q96CW5 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.69■□□□□ 0.9
TUBGCP3Q96CW5 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.69■□□□□ 0.9
TUBGCP3Q96CW5 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TUBGCP3Q96CW5 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.69■□□□□ 0.9
TUBGCP3Q96CW5 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TUBGCP3Q96CW5 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
TUBGCP3Q96CW5 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
TUBGCP3Q96CW5 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TUBGCP3Q96CW5 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.69■□□□□ 0.9
TUBGCP3Q96CW5 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TUBGCP3Q96CW5 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TUBGCP3Q96CW5 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TUBGCP3Q96CW5 OR2I1P-207ENST00000453522 948 ntBASIC20.68■□□□□ 0.9
TUBGCP3Q96CW5 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TUBGCP3Q96CW5 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TUBGCP3Q96CW5 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TUBGCP3Q96CW5 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.68■□□□□ 0.9
TUBGCP3Q96CW5 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms