Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFT1Q96AA3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RFT1Q96AA3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RFT1Q96AA3 DUX4L4-201ENST00000566884 1269 ntBASIC18.85■□□□□ 0.61
RFT1Q96AA3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.85■□□□□ 0.61
RFT1Q96AA3 AL451085.2-201ENST00000605085 799 ntBASIC18.85■□□□□ 0.61
RFT1Q96AA3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFT1Q96AA3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
RFT1Q96AA3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFT1Q96AA3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.85■□□□□ 0.61
RFT1Q96AA3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFT1Q96AA3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFT1Q96AA3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RFT1Q96AA3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RFT1Q96AA3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFT1Q96AA3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RFT1Q96AA3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RFT1Q96AA3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFT1Q96AA3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFT1Q96AA3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RFT1Q96AA3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
RFT1Q96AA3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.84■□□□□ 0.61
RFT1Q96AA3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.84■□□□□ 0.61
RFT1Q96AA3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFT1Q96AA3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RFT1Q96AA3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.84■□□□□ 0.61
RFT1Q96AA3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFT1Q96AA3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.84■□□□□ 0.61
RFT1Q96AA3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFT1Q96AA3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RFT1Q96AA3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFT1Q96AA3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RFT1Q96AA3 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.84■□□□□ 0.61
RFT1Q96AA3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.84■□□□□ 0.61
RFT1Q96AA3 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
RFT1Q96AA3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RFT1Q96AA3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RFT1Q96AA3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RFT1Q96AA3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RFT1Q96AA3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.83■□□□□ 0.6
RFT1Q96AA3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RFT1Q96AA3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFT1Q96AA3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFT1Q96AA3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFT1Q96AA3 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFT1Q96AA3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
RFT1Q96AA3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFT1Q96AA3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RFT1Q96AA3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFT1Q96AA3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RFT1Q96AA3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
RFT1Q96AA3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFT1Q96AA3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFT1Q96AA3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFT1Q96AA3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.82■□□□□ 0.6
RFT1Q96AA3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.82■□□□□ 0.6
RFT1Q96AA3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.82■□□□□ 0.6
RFT1Q96AA3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.82■□□□□ 0.6
RFT1Q96AA3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFT1Q96AA3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RFT1Q96AA3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFT1Q96AA3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.81■□□□□ 0.6
RFT1Q96AA3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
RFT1Q96AA3 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.81■□□□□ 0.6
RFT1Q96AA3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.81■□□□□ 0.6
RFT1Q96AA3 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.81■□□□□ 0.6
RFT1Q96AA3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFT1Q96AA3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.81■□□□□ 0.6
RFT1Q96AA3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.81■□□□□ 0.6
RFT1Q96AA3 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.81■□□□□ 0.6
RFT1Q96AA3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFT1Q96AA3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFT1Q96AA3 Z98882.1-201ENST00000622160 2253 ntBASIC18.81■□□□□ 0.6
RFT1Q96AA3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RFT1Q96AA3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFT1Q96AA3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RFT1Q96AA3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
RFT1Q96AA3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFT1Q96AA3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFT1Q96AA3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.8■□□□□ 0.6
RFT1Q96AA3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RFT1Q96AA3 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RFT1Q96AA3 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RFT1Q96AA3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RFT1Q96AA3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFT1Q96AA3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFT1Q96AA3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFT1Q96AA3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFT1Q96AA3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFT1Q96AA3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RFT1Q96AA3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RFT1Q96AA3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFT1Q96AA3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RFT1Q96AA3 AF106564.1-201ENST00000607058 2553 ntBASIC18.8■□□□□ 0.6
RFT1Q96AA3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RFT1Q96AA3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.79■□□□□ 0.6
RFT1Q96AA3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFT1Q96AA3 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFT1Q96AA3 FEM1AP4-201ENST00000443167 1987 ntBASIC18.79■□□□□ 0.6
RFT1Q96AA3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms