Protein–RNA interactions for Protein: Q8WVM8

SCFD1, Sec1 family domain-containing protein 1, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1Q8WVM8 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCFD1Q8WVM8 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCFD1Q8WVM8 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC23.6■■□□□ 1.37
SCFD1Q8WVM8 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.6■■□□□ 1.37
SCFD1Q8WVM8 CLDN5-201ENST00000403084 2357 ntBASIC23.6■■□□□ 1.37
SCFD1Q8WVM8 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.6■■□□□ 1.37
SCFD1Q8WVM8 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SCFD1Q8WVM8 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.59■■□□□ 1.37
SCFD1Q8WVM8 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SCFD1Q8WVM8 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.59■■□□□ 1.37
SCFD1Q8WVM8 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
SCFD1Q8WVM8 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SCFD1Q8WVM8 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SCFD1Q8WVM8 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SCFD1Q8WVM8 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SCFD1Q8WVM8 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SCFD1Q8WVM8 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.59■■□□□ 1.37
SCFD1Q8WVM8 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
SCFD1Q8WVM8 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.59■■□□□ 1.37
SCFD1Q8WVM8 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SCFD1Q8WVM8 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.58■■□□□ 1.37
SCFD1Q8WVM8 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
SCFD1Q8WVM8 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
SCFD1Q8WVM8 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC23.58■■□□□ 1.37
SCFD1Q8WVM8 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SCFD1Q8WVM8 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SCFD1Q8WVM8 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.58■■□□□ 1.37
SCFD1Q8WVM8 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.37
SCFD1Q8WVM8 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SCFD1Q8WVM8 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
SCFD1Q8WVM8 AP006587.3-201ENST00000525742 1516 ntBASIC23.58■■□□□ 1.36
SCFD1Q8WVM8 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
SCFD1Q8WVM8 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC23.57■■□□□ 1.36
SCFD1Q8WVM8 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SCFD1Q8WVM8 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SCFD1Q8WVM8 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.57■■□□□ 1.36
SCFD1Q8WVM8 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SCFD1Q8WVM8 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.57■■□□□ 1.36
SCFD1Q8WVM8 AC007375.3-201ENST00000600936 2314 ntBASIC23.57■■□□□ 1.36
SCFD1Q8WVM8 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SCFD1Q8WVM8 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SCFD1Q8WVM8 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
SCFD1Q8WVM8 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SCFD1Q8WVM8 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SCFD1Q8WVM8 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SCFD1Q8WVM8 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SCFD1Q8WVM8 AC003102.1-202ENST00000563394 1796 ntBASIC23.56■■□□□ 1.36
SCFD1Q8WVM8 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SCFD1Q8WVM8 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.56■■□□□ 1.36
SCFD1Q8WVM8 AC105265.2-201ENST00000467189 838 ntBASIC23.56■■□□□ 1.36
SCFD1Q8WVM8 AC012414.1-201ENST00000556676 535 ntBASIC23.56■■□□□ 1.36
SCFD1Q8WVM8 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SCFD1Q8WVM8 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.56■■□□□ 1.36
SCFD1Q8WVM8 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SCFD1Q8WVM8 AC244015.2-201ENST00000616358 1861 ntBASIC23.56■■□□□ 1.36
SCFD1Q8WVM8 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
SCFD1Q8WVM8 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC23.55■■□□□ 1.36
SCFD1Q8WVM8 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SCFD1Q8WVM8 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.55■■□□□ 1.36
SCFD1Q8WVM8 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SCFD1Q8WVM8 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
SCFD1Q8WVM8 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SCFD1Q8WVM8 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SCFD1Q8WVM8 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.55■■□□□ 1.36
SCFD1Q8WVM8 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.55■■□□□ 1.36
SCFD1Q8WVM8 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
SCFD1Q8WVM8 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.55■■□□□ 1.36
SCFD1Q8WVM8 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.55■■□□□ 1.36
SCFD1Q8WVM8 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC23.55■■□□□ 1.36
SCFD1Q8WVM8 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC23.55■■□□□ 1.36
SCFD1Q8WVM8 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
SCFD1Q8WVM8 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SCFD1Q8WVM8 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.54■■□□□ 1.36
SCFD1Q8WVM8 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SCFD1Q8WVM8 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SCFD1Q8WVM8 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SCFD1Q8WVM8 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SCFD1Q8WVM8 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.54■■□□□ 1.36
SCFD1Q8WVM8 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SCFD1Q8WVM8 BX005040.4-201ENST00000637145 1518 ntBASIC23.54■■□□□ 1.36
SCFD1Q8WVM8 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.54■■□□□ 1.36
SCFD1Q8WVM8 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SCFD1Q8WVM8 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
SCFD1Q8WVM8 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SCFD1Q8WVM8 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
SCFD1Q8WVM8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SCFD1Q8WVM8 MIR935-201ENST00000401179 91 ntBASIC23.53■■□□□ 1.36
SCFD1Q8WVM8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.53■■□□□ 1.36
SCFD1Q8WVM8 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.53■■□□□ 1.36
SCFD1Q8WVM8 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.53■■□□□ 1.36
SCFD1Q8WVM8 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SCFD1Q8WVM8 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SCFD1Q8WVM8 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SCFD1Q8WVM8 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
SCFD1Q8WVM8 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC23.52■■□□□ 1.36
SCFD1Q8WVM8 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.52■■□□□ 1.36
SCFD1Q8WVM8 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SCFD1Q8WVM8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
SCFD1Q8WVM8 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.52■■□□□ 1.36
SCFD1Q8WVM8 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms