Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SHKBP1Q8TBC3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
SHKBP1Q8TBC3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SHKBP1Q8TBC3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SHKBP1Q8TBC3 AC055733.4-201ENST00000638462 1354 ntBASIC22.52■■□□□ 1.2
SHKBP1Q8TBC3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
SHKBP1Q8TBC3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
SHKBP1Q8TBC3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SHKBP1Q8TBC3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC22.52■■□□□ 1.2
SHKBP1Q8TBC3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC22.52■■□□□ 1.2
SHKBP1Q8TBC3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.52■■□□□ 1.2
SHKBP1Q8TBC3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SHKBP1Q8TBC3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.52■■□□□ 1.2
SHKBP1Q8TBC3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.52■■□□□ 1.2
SHKBP1Q8TBC3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
SHKBP1Q8TBC3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SHKBP1Q8TBC3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SHKBP1Q8TBC3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
SHKBP1Q8TBC3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SHKBP1Q8TBC3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC22.51■■□□□ 1.19
SHKBP1Q8TBC3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
SHKBP1Q8TBC3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SHKBP1Q8TBC3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SHKBP1Q8TBC3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SHKBP1Q8TBC3 MIR663A-201ENST00000385250 93 ntBASIC22.51■■□□□ 1.19
SHKBP1Q8TBC3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC22.51■■□□□ 1.19
SHKBP1Q8TBC3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC22.51■■□□□ 1.19
SHKBP1Q8TBC3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SHKBP1Q8TBC3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SHKBP1Q8TBC3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SHKBP1Q8TBC3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
SHKBP1Q8TBC3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SHKBP1Q8TBC3 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SHKBP1Q8TBC3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SHKBP1Q8TBC3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
SHKBP1Q8TBC3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.5■■□□□ 1.19
SHKBP1Q8TBC3 NCF1B-203ENST00000435988 1254 ntBASIC22.5■■□□□ 1.19
SHKBP1Q8TBC3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC22.5■■□□□ 1.19
SHKBP1Q8TBC3 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC22.5■■□□□ 1.19
SHKBP1Q8TBC3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC22.5■■□□□ 1.19
SHKBP1Q8TBC3 MDK-213ENST00000617138 635 ntTSL 2 BASIC22.5■■□□□ 1.19
SHKBP1Q8TBC3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.5■■□□□ 1.19
SHKBP1Q8TBC3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SHKBP1Q8TBC3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC22.5■■□□□ 1.19
SHKBP1Q8TBC3 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SHKBP1Q8TBC3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.5■■□□□ 1.19
SHKBP1Q8TBC3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SHKBP1Q8TBC3 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SHKBP1Q8TBC3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SHKBP1Q8TBC3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SHKBP1Q8TBC3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
SHKBP1Q8TBC3 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SHKBP1Q8TBC3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SHKBP1Q8TBC3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC22.49■■□□□ 1.19
SHKBP1Q8TBC3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
SHKBP1Q8TBC3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
SHKBP1Q8TBC3 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
SHKBP1Q8TBC3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SHKBP1Q8TBC3 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SHKBP1Q8TBC3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SHKBP1Q8TBC3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SHKBP1Q8TBC3 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.48■■□□□ 1.19
SHKBP1Q8TBC3 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
SHKBP1Q8TBC3 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
SHKBP1Q8TBC3 AP001160.3-201ENST00000601484 763 ntBASIC22.48■■□□□ 1.19
SHKBP1Q8TBC3 UBE2DNL-204ENST00000602536 740 ntBASIC22.48■■□□□ 1.19
SHKBP1Q8TBC3 AL109923.1-201ENST00000618799 583 ntBASIC22.48■■□□□ 1.19
SHKBP1Q8TBC3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
SHKBP1Q8TBC3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
SHKBP1Q8TBC3 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SHKBP1Q8TBC3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SHKBP1Q8TBC3 EP400NL-214ENST00000641289 2402 ntBASIC22.47■■□□□ 1.19
SHKBP1Q8TBC3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.47■■□□□ 1.19
SHKBP1Q8TBC3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
SHKBP1Q8TBC3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC22.47■■□□□ 1.19
SHKBP1Q8TBC3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
SHKBP1Q8TBC3 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SHKBP1Q8TBC3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SHKBP1Q8TBC3 AP004607.7-201ENST00000527152 1677 ntBASIC22.46■■□□□ 1.19
SHKBP1Q8TBC3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.46■■□□□ 1.19
SHKBP1Q8TBC3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SHKBP1Q8TBC3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
SHKBP1Q8TBC3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.46■■□□□ 1.19
SHKBP1Q8TBC3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC22.46■■□□□ 1.19
SHKBP1Q8TBC3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.46■■□□□ 1.19
SHKBP1Q8TBC3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC22.46■■□□□ 1.19
SHKBP1Q8TBC3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC22.46■■□□□ 1.19
SHKBP1Q8TBC3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.46■■□□□ 1.19
SHKBP1Q8TBC3 MAZ-216ENST00000616501 991 ntTSL 5 BASIC22.46■■□□□ 1.19
SHKBP1Q8TBC3 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SHKBP1Q8TBC3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SHKBP1Q8TBC3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
SHKBP1Q8TBC3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.45■■□□□ 1.18
SHKBP1Q8TBC3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.45■■□□□ 1.18
SHKBP1Q8TBC3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
SHKBP1Q8TBC3 AL355802.2-201ENST00000402069 882 ntBASIC22.45■■□□□ 1.18
SHKBP1Q8TBC3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
SHKBP1Q8TBC3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22.45■■□□□ 1.18
SHKBP1Q8TBC3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC22.45■■□□□ 1.18
SHKBP1Q8TBC3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms